FFCP PHASE1:Hg19::chr13:40924629..40924639,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-189bp_to_ENST00000400432_5end | |association_with_transcript=-189bp_to_ENST00000400432_5end | ||
|cluster_id=chr13:40924629..40924639,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_ENST00000400432_5end | |description=CAGE_peak_4_at_ENST00000400432_5end | ||
|id=chr13:40924629..40924639,- | |id=chr13:40924629..40924639,- | ||
|ontology_enrichment_celltype=CL:0000136!4.01e-09!15;CL:0002617!2.00e-08!2 | |ontology_enrichment_celltype=CL:0000136!4.01e-09!15;CL:0002617!2.00e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!6.02e-30!2;UBERON:0006122!8.63e-16!1;UBERON:0003296!1.66e-15!4;UBERON:0010133!1.66e-15!4;UBERON:0001154!2.06e-15!1;UBERON:0001153!2.06e-15!1;UBERON:0002146!2.38e-15!1;UBERON:0005623!2.38e-15!1;UBERON:0002368!2.47e-10!35;UBERON:0009854!2.86e-10!23;UBERON:0001894!2.92e-09!7;UBERON:0006222!2.92e-09!7;UBERON:0009856!4.11e-09!26;UBERON:0002950!1.50e-08!2;UBERON:0001891!1.50e-08!2;UBERON:0009616!1.50e-08!2;UBERON:0001255!3.08e-08!2;UBERON:0001556!3.08e-08!2;UBERON:0000949!5.03e-08!45;UBERON:0002107!1.99e-07!19;UBERON:0006925!1.99e-07!19;UBERON:0008836!1.99e-07!19;UBERON:0007023!3.55e-07!115;UBERON:0001155!3.78e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.34e-79;2!UBERON:0003296;2.22e-40;4!UBERON:0010133;2.22e-40;4!UBERON:0001894;1.28e-23;7!UBERON:0002368;4.75e-19;33!UBERON:0000949;4.97e-10;43!UBERON:0002107;2.21e-09;19!UBERON:0006925;2.21e-09;19!UBERON:0002423;2.31e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.34e-79,2;UBERON:0003296,2.22e-40,4;UBERON:0010133,2.22e-40,4;UBERON:0001894,1.28e-23,7;UBERON:0006222,1.28e-23,7;UBERON:0002368,9.09e-19,35;UBERON:0000949,9.05e-15,45;UBERON:0002530,1.96e-11,59;UBERON:0002107,2.26e-09,19;UBERON:0006925,2.26e-09,19;UBERON:0008836,2.26e-09,19;UBERON:0008835,3.15e-08,22;UBERON:0003894,3.15e-08,22;UBERON:0009854,6.52e-08,23;UBERON:0007499,2.35e-07,25;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0009856,4.15e-07,26 | |||
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|short_description=p4@ENST00000400432 | |short_description=p4@ENST00000400432 | ||
}} | }} |
Latest revision as of 15:57, 24 July 2015
Short description: | p4@ENST00000400432 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000400432_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -189bp_to_ENST00000400432_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.34e-79 | 2 |
gland of diencephalon | 2.22e-40 | 4 |
neuroendocrine gland | 2.22e-40 | 4 |
diencephalon | 1.28e-23 | 7 |
future diencephalon | 1.28e-23 | 7 |
endocrine gland | 9.09e-19 | 35 |
endocrine system | 9.05e-15 | 45 |
gland | 1.96e-11 | 59 |
liver | 2.26e-09 | 19 |
digestive gland | 2.26e-09 | 19 |
liver bud | 2.26e-09 | 19 |
hepatic diverticulum | 3.15e-08 | 22 |
liver primordium | 3.15e-08 | 22 |
digestive tract diverticulum | 6.52e-08 | 23 |
epithelial sac | 2.35e-07 | 25 |
epithelium of foregut-midgut junction | 2.35e-07 | 25 |
anatomical boundary | 2.35e-07 | 25 |
hepatobiliary system | 2.35e-07 | 25 |
foregut-midgut junction | 2.35e-07 | 25 |
septum transversum | 2.35e-07 | 25 |
sac | 4.15e-07 | 26 |