FFCP PHASE1:Hg19::chr10:12939703..12939707,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83643 | |EntrezGene=83643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23813 | |HGNC=23813 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4C2 | |UniProt=Q7Z4C2 | ||
|association_with_transcript=214bp_to_AF190154_5end | |association_with_transcript=214bp_to_AF190154_5end | ||
|cluster_id=chr10:12939703..12939707,- | |||
|description=CAGE_peak_5_at_CCDC3_5end | |description=CAGE_peak_5_at_CCDC3_5end | ||
|id=chr10:12939703..12939707,- | |id=chr10:12939703..12939707,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.70e-13;13!CL:0002616;1.13e-11;1!CL:0002617;9.96e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,7.76e-12,1;CL:0000136,1.49e-11,15;CL:0002617,9.96e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006965;5.40e-22;2!UBERON:0004874;2.93e-12;1!UBERON:0006242;5.93e-12;1!UBERON:0004872;6.20e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.30e-25!115;UBERON:0001017!1.03e-10!82;UBERON:0005743!1.34e-10!86;UBERON:0000073!3.58e-10!94;UBERON:0001016!3.58e-10!94;UBERON:0000955!1.00e-08!69;UBERON:0006238!1.00e-08!69;UBERON:0002619!2.75e-08!22;UBERON:0002616!3.30e-08!59;UBERON:0001950!4.23e-08!20;UBERON:0001893!4.58e-08!34;UBERON:0002020!5.65e-08!34;UBERON:0003528!5.65e-08!34;UBERON:0000468!6.77e-08!659;UBERON:0001869!1.03e-07!32;UBERON:0000153!1.17e-07!129;UBERON:0007811!1.17e-07!129;UBERON:0002791!2.26e-07!33;UBERON:0000924!3.49e-07!173;UBERON:0006601!3.49e-07!173;UBERON:0004121!4.24e-07!169;UBERON:0001049!5.63e-07!57;UBERON:0005068!5.63e-07!57;UBERON:0006241!5.63e-07!57;UBERON:0007135!5.63e-07!57;UBERON:0000956!6.15e-07!25;UBERON:0000203!6.15e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;2.93e-12;1!UBERON:0008811;2.93e-12;1!UBERON:0002171;1.13e-11;1!UBERON:0006518;1.13e-11;1!UBERON:0008949;1.13e-11;1!UBERON:0000101;1.13e-11;1!UBERON:0002167;1.13e-11;1!UBERON:0003688;5.08e-08;6!UBERON:0002358;5.08e-08;6!UBERON:0003684;5.08e-08;6!UBERON:0001178;5.08e-08;6!UBERON:0001871;6.20e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,2.93e-12,1;UBERON:0008811,2.93e-12,1;UBERON:0006258,2.93e-12,1;UBERON:0005876,2.93e-12,1;UBERON:0004874,2.93e-12,1;UBERON:0002171,8.64e-12,1;UBERON:0006518,8.64e-12,1;UBERON:0008949,8.64e-12,1;UBERON:0000101,8.64e-12,1;UBERON:0002167,8.64e-12,1;UBERON:0003688,5.17e-08,6;UBERON:0002358,5.17e-08,6;UBERON:0003684,5.17e-08,6;UBERON:0001178,5.17e-08,6;UBERON:0001871,5.51e-07,6 | |||
|phase1_expression=0.726713517082227,4.28201047781966,0.281908808191942,7.00513088471913,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.920771839728375,3.92924132206303,0,1.53512174720011,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38807019827871,0.907604499126468,0,0,0,0,0,0.460511024178389,0,0,0,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,2.65375590096488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,1.42068073403207,0,0,0,1.9882952955326,0.422008249231538,0,0,0,3.98495976502139,0,0,0.20453736500431,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.520874984799877,0.885741385813839,0,0,0,0,0,0,0,0.538651809526579,0.341826167541004,0,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0,0,0.296521128680622,0,0.208843899010911,0,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.126621591911757,0,0,2.34798294213288,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0.558564802544508,0.687481272035051,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,1.65695622138878,0.992332043623902,0,0,0,0,1.2534494701135,0,0,0,0,3.78281421196086,0.500763722825999,0.573409195690071,0,0.0620964029413835,0.830091809617385,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0,0.109209638192014,0,0,0.495743057036009,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0,0,0.138314504928436,0.322951291263702,0,0,0,0.366857197043358,0,0,0,0.994581110581374,0.676892955143315,0,0,0,0,0,0.270150338473579,0,0.620060389503552,0.0634158101939068,0,0,5.95453414067153,0,0,0,0,0,0,0.177404740325278,0,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0.11294608203896,0,0,0,0.874238242015829,0,1.47088993052343,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.475940431336403,0,0,0.371995018166751,0,0,0,0.109265571963696,1.64708051314868,0,0,0,0,0.530450887527676,0.803892390468535,0,0,0.426467963801962,0.476128862927481,0.193766729508018,0.186224142887574,0,0.12729431655633,0.202117188958219,0.435433495793923,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,1.61019034872821,0 | |phase1_expression=0.726713517082227,4.28201047781966,0.281908808191942,7.00513088471913,0.893922188854576,1.74467704820074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.756787138224657,0.576175924479999,0,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,0,0,0.434343920002738,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.920771839728375,3.92924132206303,0,1.53512174720011,0,0,0,0,0,0,0.116210378459959,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38807019827871,0.907604499126468,0,0,0,0,0,0.460511024178389,0,0,0,0.170453254832202,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,2.65375590096488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,1.42068073403207,0,0,0,1.9882952955326,0.422008249231538,0,0,0,3.98495976502139,0,0,0.20453736500431,0,0,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0.520874984799877,0.885741385813839,0,0,0,0,0,0,0,0.538651809526579,0.341826167541004,0,0,0,0.638002319463839,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0,0,0.296521128680622,0,0.208843899010911,0,0.802577647298789,0,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.677942222341597,0,0,0.126621591911757,0,0,2.34798294213288,0.19980960958213,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0.558564802544508,0.687481272035051,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0,0,0,0.106787412567695,0,1.65695622138878,0.992332043623902,0,0,0,0,1.2534494701135,0,0,0,0,3.78281421196086,0.500763722825999,0.573409195690071,0,0.0620964029413835,0.830091809617385,0,0,0,0,0.936669811613763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0.646948868380091,0,0.109209638192014,0,0,0.495743057036009,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0,0,0.138314504928436,0.322951291263702,0,0,0,0.366857197043358,0,0,0,0.994581110581374,0.676892955143315,0,0,0,0,0,0.270150338473579,0,0.620060389503552,0.0634158101939068,0,0,5.95453414067153,0,0,0,0,0,0,0.177404740325278,0,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.285906176706625,0,0,0,0,0.414432328326074,0.17071847709395,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0.11294608203896,0,0,0,0.874238242015829,0,1.47088993052343,0,0.392616934229891,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.475940431336403,0,0,0.371995018166751,0,0,0,0.109265571963696,1.64708051314868,0,0,0,0,0.530450887527676,0.803892390468535,0,0,0.426467963801962,0.476128862927481,0.193766729508018,0.186224142887574,0,0.12729431655633,0.202117188958219,0.435433495793923,0.342233301085281,0,0.143444410785353,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,1.61019034872821,0 | ||
|short_description=p5@CCDC3 | |short_description=p5@CCDC3 | ||
}} | }} |
Latest revision as of 01:13, 17 September 2015
Short description: | p5@CCDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CCDC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 214bp_to_AF190154_5end |
EntrezGene: | CCDC3 |
HGNC: | 23813 |
UniProt: | Q7Z4C2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 7.76e-12 | 1 |
fat cell | 1.49e-11 | 15 |
adipocyte of breast | 9.96e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
penis | 2.93e-12 | 1 |
intromittent organ | 2.93e-12 | 1 |
lateral plate mesenchyme | 2.93e-12 | 1 |
undifferentiated genital tubercle | 2.93e-12 | 1 |
somatopleure | 2.93e-12 | 1 |
lower lobe of right lung | 8.64e-12 | 1 |
right lung lobe | 8.64e-12 | 1 |
lower lobe of lung | 8.64e-12 | 1 |
lobe of lung | 8.64e-12 | 1 |
right lung | 8.64e-12 | 1 |
omentum | 5.17e-08 | 6 |
peritoneum | 5.17e-08 | 6 |
abdominal cavity | 5.17e-08 | 6 |
visceral peritoneum | 5.17e-08 | 6 |
temporal lobe | 5.51e-07 | 6 |