FFCP PHASE1:Hg19::chr15:31521567..31521649,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000558109,ENST00000559853,ENST00000560812_5end | |association_with_transcript=0bp_to_ENST00000558109,ENST00000559853,ENST00000560812_5end | ||
|cluster_id=chr15:31521567..31521649,- | |||
|coexpression_cluster_id=C631 | |||
|description=CAGE_peak_1_at_ENST00000558109_5end,CAGE_peak_1_at_ENST00000559853_5end,CAGE_peak_1_at_ENST00000560812_5end | |description=CAGE_peak_1_at_ENST00000558109_5end,CAGE_peak_1_at_ENST00000559853_5end,CAGE_peak_1_at_ENST00000560812_5end | ||
|id=chr15:31521567..31521649,- | |id=chr15:31521567..31521649,- | ||
|ontology_enrichment_celltype=CL:0000945!6.63e-28!24;CL:0000826!6.63e-28!24;CL:0000236!5.29e-18!14;CL:0000542!9.89e-12!53;CL:0000051!9.89e-12!53;CL:0000838!6.07e-11!52 | |ontology_enrichment_celltype=CL:0000945!6.63e-28!24;CL:0000826!6.63e-28!24;CL:0000236!5.29e-18!14;CL:0000542!9.89e-12!53;CL:0000051!9.89e-12!53;CL:0000838!6.07e-11!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.49e-50;24!CL:0000236;2.79e-27;13!CL:0000542;1.15e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,7.55e-50,24;CL:0000826,7.55e-50,24;CL:0000236,9.01e-30,14;CL:0000542,1.12e-22,53;CL:0000051,1.12e-22,53;CL:0000838,4.26e-21,52;CL:0002087,2.75e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.15e-14;53!UBERON:0004161;2.02e-09;11!UBERON:0006595;4.35e-08;86!UBERON:0009497;8.24e-08;13!UBERON:0001041;4.96e-07;30 | |||
|ontology_enrichment_disease=DOID:305!5.90e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.68e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.07e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.47e-11!129;UBERON:0004185!1.47e-11!129;UBERON:0007023!5.73e-11!115;UBERON:0001007!9.92e-11!155;UBERON:0001555!9.92e-11!155;UBERON:0007026!9.92e-11!155;UBERON:0000178!5.12e-10!15;UBERON:0000179!5.12e-10!15;UBERON:0000463!5.12e-10!15;UBERON:0004119!8.42e-10!169;UBERON:0000925!8.42e-10!169;UBERON:0006595!8.42e-10!169;UBERON:0001041!1.93e-09!98;UBERON:0000077!9.58e-09!130;UBERON:0005409!4.17e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.37e-14;15!UBERON:0000179;4.37e-14;15!UBERON:0000463;4.37e-14;15!UBERON:0002390;1.16e-10;32!UBERON:0004921;1.47e-10;33!UBERON:0002106;1.48e-08;3!UBERON:0004177;3.16e-08;5!UBERON:0005057;3.16e-08;5!UBERON:0005409;3.69e-08;22!UBERON:0002193;2.04e-07;42!UBERON:0000160;5.29e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.74e-14,15;UBERON:0000179,3.74e-14,15;UBERON:0000463,3.74e-14,15;UBERON:0005409,1.65e-12,25;UBERON:0004921,1.39e-11,118;UBERON:0007023,9.52e-11,114;UBERON:0001041,2.78e-09,87;UBERON:0001007,8.90e-09,145;UBERON:0001555,8.90e-09,145;UBERON:0007026,8.90e-09,145;UBERON:0002106,1.51e-08,3;UBERON:0004854,1.51e-08,3;UBERON:0009034,1.51e-08,3;UBERON:0002095,1.51e-08,3;UBERON:0004782,1.51e-08,3;UBERON:0003281,1.51e-08,3;UBERON:0009664,1.51e-08,3;UBERON:0002296,1.51e-08,3;UBERON:0005602,1.51e-08,3;UBERON:0001179,1.51e-08,3;UBERON:0006293,1.51e-08,3;UBERON:0000945,1.16e-07,8;UBERON:0010039,1.16e-07,8;UBERON:0004119,2.99e-07,160;UBERON:0000925,2.99e-07,160;UBERON:0006595,2.99e-07,160;UBERON:0000160,5.78e-07,17 | |||
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|short_description=p1@ENST00000558109,p1@ENST00000559853,p1@ENST00000560812 | |short_description=p1@ENST00000558109,p1@ENST00000559853,p1@ENST00000560812 | ||
}} | }} |
Latest revision as of 00:42, 25 July 2015
Short description: | p1@ENST00000558109, p1@ENST00000559853, p1@ENST00000560812 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000558109_5end, CAGE_peak_1_at_ENST00000559853_5end, CAGE_peak_1_at_ENST00000560812_5end |
Coexpression cluster: | C631_b_plasma_xeroderma_lymphoma_splenic_Burkitt_B |
Association with transcript: | 0bp_to_ENST00000558109, ENST00000559853, ENST00000560812_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 7.55e-50 | 24 |
pro-B cell | 7.55e-50 | 24 |
B cell | 9.01e-30 | 14 |
lymphocyte | 1.12e-22 | 53 |
common lymphoid progenitor | 1.12e-22 | 53 |
lymphoid lineage restricted progenitor cell | 4.26e-21 | 52 |
nongranular leukocyte | 2.75e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 3.74e-14 | 15 |
haemolymphatic fluid | 3.74e-14 | 15 |
organism substance | 3.74e-14 | 15 |
gastrointestinal system | 1.65e-12 | 25 |
subdivision of digestive tract | 1.39e-11 | 118 |
adult organism | 9.52e-11 | 114 |
foregut | 2.78e-09 | 87 |
digestive system | 8.90e-09 | 145 |
digestive tract | 8.90e-09 | 145 |
primitive gut | 8.90e-09 | 145 |
spleen | 1.51e-08 | 3 |
gastrointestinal system mesentery | 1.51e-08 | 3 |
stomach region | 1.51e-08 | 3 |
mesentery | 1.51e-08 | 3 |
gastrointestinal system serosa | 1.51e-08 | 3 |
mesentery of stomach | 1.51e-08 | 3 |
gut mesentery | 1.51e-08 | 3 |
dorsal mesentery | 1.51e-08 | 3 |
dorsal mesogastrium | 1.51e-08 | 3 |
peritoneal cavity | 1.51e-08 | 3 |
spleen primordium | 1.51e-08 | 3 |
stomach | 1.16e-07 | 8 |
food storage organ | 1.16e-07 | 8 |
endoderm-derived structure | 2.99e-07 | 160 |
endoderm | 2.99e-07 | 160 |
presumptive endoderm | 2.99e-07 | 160 |
intestine | 5.78e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.07e-12 | 10 |