FFCP PHASE1:Hg19::chr10:99187490..99187507,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5223 | |EntrezGene=5223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8888 | |HGNC=8888 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_uc010qov.1_5end | |association_with_transcript=56bp_to_uc010qov.1_5end | ||
|cluster_id=chr10:99187490..99187507,+ | |||
|description=CAGE_peak_6_at_PGAM1_5end | |description=CAGE_peak_6_at_PGAM1_5end | ||
|id=chr10:99187490..99187507,+ | |id=chr10:99187490..99187507,+ | ||
|ontology_enrichment_celltype=CL:0002321!8.92e-22!248;CL:0000220!6.63e-21!246;CL:0000055!3.20e-15!180;CL:0000548!1.72e-12!679;CL:0000004!1.72e-12!679;CL:0000255!1.72e-12!679;CL:0000012!4.00e-12!682;CL:0000144!1.24e-09!625;CL:0000359!2.27e-09!32;CL:0000066!2.32e-09!254;CL:0000192!6.01e-09!42;CL:0000514!6.01e-09!42;CL:0000393!7.08e-09!60;CL:0000211!7.08e-09!60;CL:0000222!8.22e-09!119;CL:0000003!5.82e-08!722;CL:0000183!5.93e-08!59;CL:0000187!2.24e-07!54;CL:0002076!2.50e-07!43;CL:0000680!3.65e-07!57;CL:0000056!3.65e-07!57;CL:0000355!3.65e-07!57;CL:0000221!4.66e-07!71;CL:0002371!6.39e-07!591 | |ontology_enrichment_celltype=CL:0002321!8.92e-22!248;CL:0000220!6.63e-21!246;CL:0000055!3.20e-15!180;CL:0000548!1.72e-12!679;CL:0000004!1.72e-12!679;CL:0000255!1.72e-12!679;CL:0000012!4.00e-12!682;CL:0000144!1.24e-09!625;CL:0000359!2.27e-09!32;CL:0000066!2.32e-09!254;CL:0000192!6.01e-09!42;CL:0000514!6.01e-09!42;CL:0000393!7.08e-09!60;CL:0000211!7.08e-09!60;CL:0000222!8.22e-09!119;CL:0000003!5.82e-08!722;CL:0000183!5.93e-08!59;CL:0000187!2.24e-07!54;CL:0002076!2.50e-07!43;CL:0000680!3.65e-07!57;CL:0000056!3.65e-07!57;CL:0000355!3.65e-07!57;CL:0000221!4.66e-07!71;CL:0002371!6.39e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002621;1.78e-12;3!CL:0002166;2.15e-12;3!CL:0000077;7.20e-11;19!CL:0002159;6.42e-09;14!CL:0000047;5.90e-08;2!CL:0000317;5.90e-08;2!CL:1000448;5.90e-08;2!CL:0002308;5.90e-08;2!CL:0002140;5.90e-08;2!CL:0002322;7.95e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.84e-15,250;CL:0002621,1.55e-12,3;CL:0002166,1.95e-12,3;CL:0000047,5.60e-11,8;CL:0000077,5.86e-11,19;CL:0002159,7.48e-09,14;CL:0000076,5.60e-08,63;CL:0000317,1.05e-07,2;CL:1000448,1.05e-07,2;CL:0002308,1.05e-07,2;CL:0002140,1.05e-07,2;CL:0000066,1.47e-07,253;CL:0000221,2.06e-07,72;CL:0000222,5.34e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.79e-08!82;UBERON:0002100!1.75e-07!216;UBERON:0000475!2.08e-07!365;UBERON:0005256!2.78e-07!143;UBERON:0001637!4.21e-07!42;UBERON:0003509!4.21e-07!42;UBERON:0004572!4.21e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0001949;1.78e-12;3!UBERON:0001708;2.16e-09;4!UBERON:0008895;2.16e-09;4!UBERON:0002419;5.90e-08;2!UBERON:0007771;5.90e-08;2!UBERON:0003297;5.90e-08;2!UBERON:0001821;5.90e-08;2!UBERON:0003487;5.90e-08;2!UBERON:0001820;5.90e-08;2!UBERON:0011159;1.40e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.55e-12,3;UBERON:0001708,2.01e-09,4;UBERON:0008895,2.01e-09,4;UBERON:0002419,1.05e-07,2;UBERON:0007771,1.05e-07,2;UBERON:0003297,1.05e-07,2;UBERON:0001821,1.05e-07,2;UBERON:0003487,1.05e-07,2;UBERON:0001820,1.05e-07,2;UBERON:0005089,1.05e-07,2;UBERON:0005088,1.05e-07,2;UBERON:0011159,1.32e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,1.0007329835313,0.893922188854576,1.74467704820074,0,0.631719873426831,0,0.491467873003018,0.697801167972428,0.218441372130172,0,0,0,0.672325146451775,1.80808358407193,2.19093027116212,0,0.246242116153576,0,0,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,1.00267582127178,0.144846518960824,0.795285947051099,0.486634870302636,0.378139268656271,0.443458794925128,0.175669571386252,0,1.45718115317017,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0,0,0,0,1.52054421143703,0,0,0,0,0.22452937262617,0,1.53316637465883,0,0,0,0,0.436094052142534,0.496971951695318,0.25326102332916,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0.98667019366864,0,0,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.408308342509787,0.368502951935304,0.206651562351531,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.423863802319124,0.300091096084402,0.103052529238439,0.515281080091258,0.37223371266318,0,0.389748020644795,0.252433774244115,0.460249493211497,0.323292113637624,0,0.403008392910561,0.339121184620975,3.86521706326594,3.54569956768085,3.44165514466805,0.243947412259191,1.32529768321485,1.2781333715647,0.310983165046111,1.26160425437814,0.72995471815166,1.56449532329816,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,0.658501712451753,0,0,0.370353780634118,0.651616610620649,0,0,0.115930404975077,0.469634776943287,0.433099343283221,0,1.14152491340759,0,0,0,0,0,2.81201501960331,7.0552493843521,2.41017665312057,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0,0,0,1.68053230485111,0,0.845302752556,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,1.80863626235752,6.97226766880235,1.49959486773086,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0,0,0,0,1.01637849688985,1.30139853857622,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0.767309866440312,0.280660094433074,1.40953064181271,0,0.321707842287215,0,0.462629081407967,0.355123450626254,0.246381468041427,1.03850885836724,0.232420756919918,0.725156697549733,3.40860999515584,0.0920809889358963,0,0.182091168006717,0.655622074797121,0.902399225814824,1.38627606787947,0,0,1.37217117560738,1.13733384070897,0.170093705276516,0.215915916102139,0,0.541892875087706,1.50506932156456,0,0.831076008928724,1.34324852833307,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0.096670718292122,0,0,0,0,0,0.255679882248303,0.267096106940212,1.4875642382488,0.384380134730212,0,0,0,0.31481234683064,0,0.616067160352178,1.59691809095107,0.869932992075073,0.9266210955196,0.286249773483982,0,0.316379424718726,0.762520775695299,0,0,0,0,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0.421258456238981,0,1.46228093778771,0,0.272999822815972,0.565621727814851,0,0.551365343546124,1.99031692572366,0.876901770507525,0.578775534266688,0,1.82619339266434,1.239293992399,0.281695602532241,0.286822704408103,0.196498082026242,0.35667105148125,0,0.422215270595328,0,0,0,0.48111056362756,0.670302275535787,1.08890984861323,0,6.02707521739722,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0.102268682502155,0,2.17727711363265,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,1.05226393590145,0.311064574191741,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0.137041924646751,0,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0.114536596165916,0,0.14405479798815,0,0,0.135904206073614,0.627617077873999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,1.28602518772015,2.33817042215297,3.73896304226267,0,0,0,0.335434687599266,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0.542999601753713,4.32110745600634,0.653174720218818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0.701139929541673,0,0,0.251567901752575,0,1.60188047877847,0,0.466311601748341,0.147855149989634,0.63718706865481,1.34940933649081,0.776314784381297,0,0,0.521745061811734,0.450772826991655,0.761610424337591,0,0.545545977607678,0.429642228169954,0,0.796191777397232,0,0,0.3367494887659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| ||
|short_description=p6@PGAM1 | |short_description=p6@PGAM1 | ||
}} | }} |
Latest revision as of 06:30, 20 September 2015
Short description: | p6@PGAM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PGAM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 56bp_to_uc010qov.1_5end |
EntrezGene: | PGAM1 |
HGNC: | 8888 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.84e-15 | 250 |
gingival epithelial cell | 1.55e-12 | 3 |
epithelial cell of Malassez | 1.95e-12 | 3 |
neuronal stem cell | 5.60e-11 | 8 |
mesothelial cell | 5.86e-11 | 19 |
general ecto-epithelial cell | 7.48e-09 | 14 |
squamous epithelial cell | 5.60e-08 | 63 |
sebum secreting cell | 1.05e-07 | 2 |
epithelial cell of sweat gland | 1.05e-07 | 2 |
epithelial cell of skin gland | 1.05e-07 | 2 |
acinar cell of sebaceous gland | 1.05e-07 | 2 |
epithelial cell | 1.47e-07 | 253 |
ectodermal cell | 2.06e-07 | 72 |
mesodermal cell | 5.34e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 1.55e-12 | 3 |
jaw skeleton | 2.01e-09 | 4 |
splanchnocranium | 2.01e-09 | 4 |
skin gland | 1.05e-07 | 2 |
epidermis gland | 1.05e-07 | 2 |
gland of integumental system | 1.05e-07 | 2 |
sebaceous gland | 1.05e-07 | 2 |
skin sebaceous gland | 1.05e-07 | 2 |
sweat gland | 1.05e-07 | 2 |
sweat gland placode | 1.05e-07 | 2 |
sebaceous gland placode | 1.05e-07 | 2 |
primary subdivision of cranial skeletal system | 1.32e-07 | 5 |