FFCP PHASE1:Hg19::chr15:39874415..39874435,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39874415..39874435,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_at_chr15:39874415..39874435,+ | |description=CAGE_peak_at_chr15:39874415..39874435,+ | ||
|id=chr15:39874415..39874435,+ | |id=chr15:39874415..39874435,+ | ||
|ontology_enrichment_celltype=CL:0000057!3.27e-14!75;CL:0000055!6.19e-14!180;CL:0002371!2.06e-13!591;CL:0002139!1.67e-11!24;CL:0000144!5.82e-11!625;CL:0000220!4.19e-10!246;CL:0002321!9.43e-10!248;CL:0000548!1.30e-09!679;CL:0000004!1.30e-09!679;CL:0000255!1.30e-09!679;CL:0000012!1.36e-09!682;CL:0000222!1.70e-09!119;CL:0000115!7.11e-09!35;CL:0002078!2.82e-08!44;CL:0000071!2.92e-08!18;CL:0002546!2.92e-08!18;CL:0002620!1.24e-07!23 | |ontology_enrichment_celltype=CL:0000057!3.27e-14!75;CL:0000055!6.19e-14!180;CL:0002371!2.06e-13!591;CL:0002139!1.67e-11!24;CL:0000144!5.82e-11!625;CL:0000220!4.19e-10!246;CL:0002321!9.43e-10!248;CL:0000548!1.30e-09!679;CL:0000004!1.30e-09!679;CL:0000255!1.30e-09!679;CL:0000012!1.36e-09!682;CL:0000222!1.70e-09!119;CL:0000115!7.11e-09!35;CL:0002078!2.82e-08!44;CL:0000071!2.92e-08!18;CL:0002546!2.92e-08!18;CL:0002620!1.24e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.28e-17;24!CL:0000115;7.40e-13;36!CL:0000071;1.39e-12;18!CL:0002620;1.01e-10;23!CL:1000413;1.94e-08;9!CL:0002078;3.78e-08;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.23e-16,24;CL:0000115,9.36e-15,36;CL:0000057,7.14e-14,76;CL:0000071,1.52e-12,18;CL:0002546,1.52e-12,18;CL:0002078,1.64e-11,45;CL:0002620,1.13e-10,23;CL:1000413,1.22e-08,9;CL:0000213,1.87e-08,58;CL:0000215,1.87e-08,58;CL:0000222,2.43e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;1.39e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.58e-08;5!DOID:450;5.58e-08;5!DOID:66;5.58e-08;5!DOID:423;5.58e-08;5!DOID:0080000;5.58e-08;5!DOID:11722;5.58e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.88e-08,5;DOID:450,4.88e-08,5;DOID:66,4.88e-08,5;DOID:423,4.88e-08,5;DOID:0080000,4.88e-08,5;DOID:11722,4.88e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002049!7.87e-13!79;UBERON:0007798!7.87e-13!79;UBERON:0000055!4.63e-12!69;UBERON:0001981!1.14e-10!60;UBERON:0007500!1.14e-10!60;UBERON:0004537!1.14e-10!60;UBERON:0006965!1.14e-10!60;UBERON:0001637!2.45e-10!42;UBERON:0003509!2.45e-10!42;UBERON:0004572!2.45e-10!42;UBERON:0004872!2.53e-10!84;UBERON:0003102!7.41e-09!95;UBERON:0001986!2.92e-08!18;UBERON:0004638!2.92e-08!18;UBERON:0004852!2.92e-08!18;UBERON:0001009!2.97e-08!113;UBERON:0004535!4.58e-08!110;UBERON:0000468!4.59e-08!659;UBERON:0002097!6.63e-08!40;UBERON:0000490!9.63e-08!138;UBERON:0000487!1.04e-07!22;UBERON:0006914!1.56e-07!25;UBERON:0000467!2.52e-07!625;UBERON:0000480!3.29e-07!626;UBERON:0002199!3.32e-07!45;UBERON:0002416!3.32e-07!45;UBERON:0003914!3.91e-07!118;UBERON:0004573!4.67e-07!33;UBERON:0004571!4.67e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.39e-12;18!UBERON:0001986;1.39e-12;18!UBERON:0004852;1.39e-12;18!UBERON:0000487;2.63e-11;22!UBERON:0003688;4.45e-10;6!UBERON:0002358;4.45e-10;6!UBERON:0003684;4.45e-10;6!UBERON:0001178;4.45e-10;6!UBERON:0007500;8.34e-10;56!UBERON:0001981;8.34e-10;56!UBERON:0004537;8.34e-10;56!UBERON:0006914;1.95e-09;25!UBERON:0001637;3.40e-09;42!UBERON:0003509;3.40e-09;42!UBERON:0004572;3.40e-09;42!UBERON:0000055;8.35e-09;65!UBERON:0003915;1.94e-08;9!UBERON:0004700;1.94e-08;9!UBERON:0001917;1.94e-08;9!UBERON:0000490;2.22e-08;33!UBERON:0002097;7.88e-08;41!UBERON:0004573;3.46e-07;33!UBERON:0004571;3.46e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.22e-15,68;UBERON:0007500,2.11e-13,59;UBERON:0001981,2.11e-13,59;UBERON:0004537,2.11e-13,59;UBERON:0006965,2.11e-13,59;UBERON:0002049,3.84e-13,78;UBERON:0007798,3.84e-13,78;UBERON:0004638,1.52e-12,18;UBERON:0001986,1.52e-12,18;UBERON:0004852,1.52e-12,18;UBERON:0001637,1.23e-11,42;UBERON:0003509,1.23e-11,42;UBERON:0004572,1.23e-11,42;UBERON:0000487,2.80e-11,22;UBERON:0004872,9.44e-11,83;UBERON:0003688,4.38e-10,6;UBERON:0002358,4.38e-10,6;UBERON:0003684,4.38e-10,6;UBERON:0001178,4.38e-10,6;UBERON:0002097,9.73e-10,41;UBERON:0006914,2.05e-09,25;UBERON:0004535,5.74e-09,109;UBERON:0003914,5.86e-09,117;UBERON:0003915,1.22e-08,9;UBERON:0004700,1.22e-08,9;UBERON:0001917,1.22e-08,9;UBERON:0001009,1.88e-08,112;UBERON:0002199,4.74e-08,46;UBERON:0002416,4.74e-08,46;UBERON:0004573,9.97e-08,33;UBERON:0004571,9.97e-08,33 | |||
|phase1_expression=6.17706489519893,11.3473277662221,3.24195129420734,14.0102617694383,5.81049422755474,13.9574163856059,0,0,0,0.491467873003018,0,0.436882744260345,1.31883489114227,0.123766352960047,0.331397375727916,2.01697543935533,0.602694528023977,0.730310090387373,1.46379839637152,0,0.816002764977012,0.313454721478088,0.286235987131057,0.273748850145768,0.502170558379211,0,0,0,0,0,0.154816123316076,0.919421224478927,1.204823675113,1.10926203050036,0,0,0,0.553995408531877,1.60435557976113,0.217010870715852,0,0,0,0.290796477559129,0,0,0.929716147622738,0.822335776043652,0,3.74000110018796,0.512321413058201,0,1.72372840368309,0,0,1.12945403725563,0,0,2.44867113896722,0.320929027076094,0.639337125799041,1.31940520074686,0,0.426224750532694,3.48251086354301,0,0,1.7587406567972,0,0,1.21079900526674,1.10483290796269,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0.722878304769133,2.00535164254356,0.579386075843295,0,1.94653948121054,0.0945348171640679,0.443458794925128,0.175669571386252,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,1.39133685156694,0.860234595106124,1.73570250803797,9.04492707078415,2.51699661725944,1.92582629358047,1.25396979922086,1.03366703667732,0.71153252537342,2.34304428935269,1.20848795132744,1.52054421143703,2.4406205754817,2.20597848207521,3.24056779152704,1.07159673940896,1.12264686313085,1.35133776579987,0,0,2.38162267109529,0,0,0.436094052142534,20.3758500195081,3.79891534993739,2.38336525463794,1.43418310374407,0,0,1.06748995729705,3.45334567784024,1.55605517699883,0.538842688278752,0.817309515567294,0.151357427644931,0.576175924479999,0,0,0,0.448346041655403,0,0,0,0.61246251376468,0.122834317311768,0.516628905878827,2.37600571456411,6.42894016124248,0,0,0,0,0.554128230968366,3.07284334616587,3.37136575378922,6.61047459189026,0.113432183160021,7.35497506324334,4.05759038755278,3.39091041855299,3.60109315301283,2.67936576019941,4.89517026086695,2.04728541964749,3.03797398034279,2.14361411354637,2.52433774244115,2.57739716198438,2.42469085228218,4.61512470271599,1.41052937518696,0.67824236924195,0,2.18196896472668,1.72082757233402,0,0,0,0,0,0,1.56449532329816,3.85944562915731,2.76269842704961,0.464367928031979,0.721879481669586,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.245976877086227,0,1.31700342490351,0,0.301586917234893,0.462942225792648,0.325808305310325,0,0,0,0.117408694235822,3.3204282985047,2.31492756288305,3.80508304469197,0,0.858486162094873,0,0,0,0,1.34385702559088,0.708875486211932,0.716468181622786,0.290633938513962,2.30029607499127,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0.43596006883328,0,0.129271715757778,0,0,2.39344304926383,1.04007436911366,0.514414748524284,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,1.67737398844108,0,0,0.289562613335158,1.02738161275192,0.895304816199478,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0.24538298343828,0,0,8.7347761842939,6.60187258549499,6.15039418632345,8.08275763449721,2.10662269809403,6.82222512167955,0,0,2.21243002250044,0.695068915744663,0,0,0,0,0,0.606255142892519,0,0.30239029332968,4.96215615637554,10.7423381301644,12.0683840606222,4.99742682097234,8.18731598506726,9.97294311090366,4.45254199334973,0.771048469013278,0.532685175939381,0.164254312027618,0,0.464841513839837,0,1.40354529212299,0.368323955743585,0.459257792658427,0.182091168006717,0.393373244878272,0,0,0,0,0,7.96133688496276,1.36074964221213,2.15915916102139,6.16909010761157,0,0,0,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,1.95018073810956,4.82051789532479,0,0,0,0.689182862422653,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,1.32227932288782,1.34533047155574,0.893288987462089,0.2023155617111,0,4.09256050879832,0,0,0,0,1.66791797193528,0.286249773483982,0,1.2655176988749,0.762520775695299,0,0,0,2.35484592059769,0.359744915166629,0,0.824686816419805,0.202182481573316,0,1.68503382495592,0,0.487426979262569,3.16950440270266,0.272999822815972,1.1312434556297,1.13008116620243,1.65409603063837,0.66343897524122,2.63070531152258,0,0,1.21746226177622,1.8589409885985,0.281695602532241,0,0.0982490410131212,1.78335525740625,0,0.633322905892992,0.329294892959902,0,0.349934720244983,0.192444225451024,0.670302275535787,0,0.376575203107117,1.29151611801369,3.36942951335251,0.886860307073351,1.83778720165568,0,0,0,0,0,0,0,0,0,4.81239927631679,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0,0,0,0,3.58116727106535,0.296964680832639,3.99308912729002,0,0,0.111308705022906,0,0,0,0,0,0.306806047506464,0,4.97663340258892,1.16828856491525,0.537063524026827,0,0.197286811273867,0,4.44547960578548,0,0,1.99613798001194,0.520855522170466,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0.4557682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| ||
|short_description=p@chr15:39874415..39874435,+ | |short_description=p@chr15:39874415..39874435,+ | ||
}} | }} |
Latest revision as of 01:12, 25 July 2015
Short description: | p@chr15:39874415..39874435, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39874415..39874435, + |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.23e-16 | 24 |
endothelial cell | 9.36e-15 | 36 |
fibroblast | 7.14e-14 | 76 |
blood vessel endothelial cell | 1.52e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.52e-12 | 18 |
meso-epithelial cell | 1.64e-11 | 45 |
skin fibroblast | 1.13e-10 | 23 |
endothelial cell of artery | 1.22e-08 | 9 |
lining cell | 1.87e-08 | 58 |
barrier cell | 1.87e-08 | 58 |
mesodermal cell | 2.43e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.22e-15 | 68 |
epithelial tube open at both ends | 2.11e-13 | 59 |
blood vessel | 2.11e-13 | 59 |
blood vasculature | 2.11e-13 | 59 |
vascular cord | 2.11e-13 | 59 |
vasculature | 3.84e-13 | 78 |
vascular system | 3.84e-13 | 78 |
blood vessel endothelium | 1.52e-12 | 18 |
endothelium | 1.52e-12 | 18 |
cardiovascular system endothelium | 1.52e-12 | 18 |
artery | 1.23e-11 | 42 |
arterial blood vessel | 1.23e-11 | 42 |
arterial system | 1.23e-11 | 42 |
simple squamous epithelium | 2.80e-11 | 22 |
splanchnic layer of lateral plate mesoderm | 9.44e-11 | 83 |
omentum | 4.38e-10 | 6 |
peritoneum | 4.38e-10 | 6 |
abdominal cavity | 4.38e-10 | 6 |
visceral peritoneum | 4.38e-10 | 6 |
skin of body | 9.73e-10 | 41 |
squamous epithelium | 2.05e-09 | 25 |
cardiovascular system | 5.74e-09 | 109 |
epithelial tube | 5.86e-09 | 117 |
endothelial tube | 1.22e-08 | 9 |
arterial system endothelium | 1.22e-08 | 9 |
endothelium of artery | 1.22e-08 | 9 |
circulatory system | 1.88e-08 | 112 |
integument | 4.74e-08 | 46 |
integumental system | 4.74e-08 | 46 |
systemic artery | 9.97e-08 | 33 |
systemic arterial system | 9.97e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.88e-08 | 5 |
myotonic disease | 4.88e-08 | 5 |
muscle tissue disease | 4.88e-08 | 5 |
myopathy | 4.88e-08 | 5 |
muscular disease | 4.88e-08 | 5 |
myotonic dystrophy | 4.88e-08 | 5 |