FFCP PHASE1:Hg19::chr10:113975111..113975114,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:113975111..113975114,-
|short_description=p6@GPAM
|description=CAGE_peak_6_at_GPAM_5end
|association_with_transcript=20bp_to_ENST00000480130_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57678 | |EntrezGene=57678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24865 | |HGNC=24865 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000480130_5end | |||
|cluster_id=chr10:113975111..113975114,- | |||
|coexpression_cluster_id=C29 | |||
|description=CAGE_peak_6_at_GPAM_5end | |||
|id=chr10:113975111..113975114,- | |||
|ontology_enrichment_celltype=CL:0000136!5.76e-22!15;CL:0000181!4.07e-10!12;CL:0000417!4.07e-10!12;CL:0000668!4.07e-10!12;CL:0000414!4.07e-10!12;CL:0000412!4.07e-10!12;CL:0000182!4.07e-10!12;CL:0002521!1.81e-09!3;CL:0002615!3.44e-09!3;CL:0002580!3.71e-08!3;CL:0000325!7.40e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.36e-36;13!CL:0002521;5.98e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.66e-31,15;CL:0002521,5.69e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.53e-08;1!UBERON:0008801;1.53e-08;1!UBERON:0005754;1.53e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.04e-12!19;UBERON:0006925!2.04e-12!19;UBERON:0008836!2.04e-12!19;UBERON:0009854!4.01e-12!23;UBERON:0003688!1.83e-11!6;UBERON:0002358!1.83e-11!6;UBERON:0003684!1.83e-11!6;UBERON:0001178!1.83e-11!6;UBERON:0009497!6.82e-11!25;UBERON:0000015!6.82e-11!25;UBERON:0002423!6.82e-11!25;UBERON:0006235!6.82e-11!25;UBERON:0004161!6.82e-11!25;UBERON:0009856!1.92e-10!26;UBERON:0008835!1.95e-10!22;UBERON:0003894!1.95e-10!22;UBERON:0002417!5.33e-10!61;UBERON:0000916!5.33e-10!61;UBERON:0002190!1.81e-09!3;UBERON:0007499!6.17e-09!25;UBERON:0005057!1.63e-08!26;UBERON:0009569!1.66e-08!113;UBERON:0002365!2.27e-08!31;UBERON:0002330!2.27e-08!31;UBERON:0003929!1.27e-07!54;UBERON:0007023!2.15e-07!115;UBERON:0002368!4.84e-07!35;UBERON:0000466!5.93e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;5.98e-11;3!UBERON:0002107;1.02e-09;19!UBERON:0006925;1.02e-09;19!UBERON:0007029;7.75e-09;1!UBERON:0001154;1.53e-08;1!UBERON:0001831;1.53e-08;1!UBERON:0000998;1.53e-08;1!UBERON:0002146;1.53e-08;1!UBERON:0001153;1.53e-08;1!UBERON:0006868;1.53e-08;1!UBERON:0009854;1.53e-08;1!UBERON:0005623;1.53e-08;1!UBERON:0001567;1.53e-08;1!UBERON:0002365;3.26e-08;31!UBERON:0002330;3.26e-08;31!UBERON:0002423;2.47e-07;25!UBERON:0002072;6.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,3.70e-11,23;UBERON:0002190,5.69e-11,3;UBERON:0009856,8.19e-10,26;UBERON:0002107,1.03e-09,19;UBERON:0006925,1.03e-09,19;UBERON:0008836,1.03e-09,19;UBERON:0007029,6.16e-09,1;UBERON:0000998,1.13e-08,1;UBERON:0006868,1.13e-08,1;UBERON:0002146,1.32e-08,1;UBERON:0005623,1.32e-08,1;UBERON:0001154,1.78e-08,1;UBERON:0001153,1.78e-08,1;UBERON:0001045,1.78e-08,1;UBERON:0001831,2.06e-08,1;UBERON:0001567,2.06e-08,1;UBERON:0008801,2.06e-08,1;UBERON:0008835,2.33e-08,22;UBERON:0003894,2.33e-08,22;UBERON:0002365,3.89e-08,31;UBERON:0002330,3.89e-08,31;UBERON:0007499,2.49e-07,25;UBERON:0009497,2.49e-07,25;UBERON:0000015,2.49e-07,25;UBERON:0002423,2.49e-07,25;UBERON:0006235,2.49e-07,25;UBERON:0004161,2.49e-07,25;UBERON:0002072,6.45e-07,5 | |||
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|phase1_expression=0,3.63970890614671,0.986680828671798,1.0007329835313,0.893922188854576,0,2.53299878168311,0.631719873426831,2.35067065379855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,9.82827216677626,4.72631925345123,0,2.21379189377604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.384417447767103,0,0.482561763430822,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67906630284078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0,0,0,1.10273068709225,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9812780952444,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.353830258013357,0,0,0.370691816839509,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,0,2.23073497220554,0,0,0,0,0,0,0.866851769704557,0,0,0,0,0.262887354279314,0.279282401272254,1.3749625440701,0,0,0.429226048136571,0,0,0.360299883542404,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,1.17241786942466,1.32506888912221,0,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,11.424373870759,10.2782856549307,14.7045876846462,26.885555718204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24349760466224,0,0,0,0.310525913752519,0,0,0,0.751288044986092,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539124056983409,0,0.327628914576042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0.992422356778588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0.647428837187895,0,0,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606229585745915,0.803892390468535,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21401172950129,0 | ||
|short_description=p6@GPAM | |||
}} | }} |
Latest revision as of 10:13, 16 September 2015
Short description: | p6@GPAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPAM_5end |
Coexpression cluster: | C29_mature_adipose_Adipocyte_breast_Lymphatic_vein_heart |
Association with transcript: | 20bp_to_ENST00000480130_5end |
EntrezGene: | GPAM |
HGNC: | 24865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.66e-31 | 15 |
subcutaneous fat cell | 5.69e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 3.70e-11 | 23 |
subcutaneous adipose tissue | 5.69e-11 | 3 |
sac | 8.19e-10 | 26 |
liver | 1.03e-09 | 19 |
digestive gland | 1.03e-09 | 19 |
liver bud | 1.03e-09 | 19 |
surface | 6.16e-09 | 1 |
seminal vesicle | 1.13e-08 | 1 |
seminal fluid secreting gland | 1.13e-08 | 1 |
pulmonary valve | 1.32e-08 | 1 |
semi-lunar valve | 1.32e-08 | 1 |
vermiform appendix | 1.78e-08 | 1 |
caecum | 1.78e-08 | 1 |
midgut | 1.78e-08 | 1 |
parotid gland | 2.06e-08 | 1 |
cheek | 2.06e-08 | 1 |
parotid gland primordium | 2.06e-08 | 1 |
hepatic diverticulum | 2.33e-08 | 22 |
liver primordium | 2.33e-08 | 22 |
exocrine gland | 3.89e-08 | 31 |
exocrine system | 3.89e-08 | 31 |
epithelial sac | 2.49e-07 | 25 |
epithelium of foregut-midgut junction | 2.49e-07 | 25 |
anatomical boundary | 2.49e-07 | 25 |
hepatobiliary system | 2.49e-07 | 25 |
foregut-midgut junction | 2.49e-07 | 25 |
septum transversum | 2.49e-07 | 25 |
hypodermis | 6.45e-07 | 5 |