FFCP PHASE1:Hg19::chr10:115312828..115312833,+: Difference between revisions
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|id=chr10:115312828..115312833,+
|short_description=p4@HABP2
|description=CAGE_peak_4_at_HABP2_5end
|association_with_transcript=0bp_to_ENST00000541666_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3026 | |EntrezGene=3026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4798 | |HGNC=4798 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z8Q5 | |UniProt=B7Z8Q5 | ||
|association_with_transcript=0bp_to_ENST00000541666_5end | |||
|cluster_id=chr10:115312828..115312833,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_4_at_HABP2_5end | |||
|id=chr10:115312828..115312833,+ | |||
|ontology_enrichment_celltype=CL:0002322!3.30e-15!5;CL:0000181!9.69e-12!12;CL:0000417!9.69e-12!12;CL:0000668!9.69e-12!12;CL:0000414!9.69e-12!12;CL:0000412!9.69e-12!12;CL:0000182!9.69e-12!12;CL:0000313!1.06e-09!1;CL:0002563!3.30e-09!4;CL:0000148!7.18e-08!10;CL:0000541!7.18e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.66e-24;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.71e-24,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.98e-26;11!UBERON:0009497;1.93e-22;13!UBERON:0006242;3.57e-19;1!UBERON:0003104;4.92e-14;31 | |||
|ontology_enrichment_disease=DOID:2152!1.06e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!3.96e-16!25;UBERON:0000015!3.96e-16!25;UBERON:0002423!3.96e-16!25;UBERON:0006235!3.96e-16!25;UBERON:0004161!3.96e-16!25;UBERON:0002107!6.62e-16!19;UBERON:0006925!6.62e-16!19;UBERON:0008836!6.62e-16!19;UBERON:0003929!4.05e-14!54;UBERON:0005172!7.49e-14!55;UBERON:0005173!7.49e-14!55;UBERON:0008835!1.13e-13!22;UBERON:0003894!1.13e-13!22;UBERON:0009854!4.66e-13!23;UBERON:0002417!2.47e-12!61;UBERON:0000916!2.47e-12!61;UBERON:0007499!5.64e-12!25;UBERON:0005057!1.70e-11!26;UBERON:0009856!1.70e-11!26;UBERON:0004911!1.06e-09!1;UBERON:0002365!1.47e-09!31;UBERON:0002330!1.47e-09!31;UBERON:0001301!1.48e-09!1;UBERON:0001242!3.30e-09!4;UBERON:0001262!3.30e-09!4;UBERON:0004786!3.30e-09!4;UBERON:0004808!3.30e-09!4;UBERON:0001277!3.30e-09!4;UBERON:0005911!9.29e-09!82;UBERON:0002368!2.08e-08!35;UBERON:0003350!1.55e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;5.26e-35;25!UBERON:0002107;4.27e-34;19!UBERON:0006925;4.27e-34;19!UBERON:0002365;5.68e-21;31!UBERON:0002330;5.68e-21;31!UBERON:0002368;7.02e-18;33!UBERON:0005172;3.98e-15;52!UBERON:0005173;3.98e-15;52!UBERON:0000949;1.58e-10;43!UBERON:0002417;1.30e-08;58!UBERON:0000916;1.30e-08;58!UBERON:0002110;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,4.87e-35,25;UBERON:0000015,4.87e-35,25;UBERON:0002423,4.87e-35,25;UBERON:0006235,4.87e-35,25;UBERON:0004161,4.87e-35,25;UBERON:0002107,4.27e-34,19;UBERON:0006925,4.27e-34,19;UBERON:0008836,4.27e-34,19;UBERON:0008835,1.86e-29,22;UBERON:0003894,1.86e-29,22;UBERON:0009854,3.54e-28,23;UBERON:0007499,6.31e-26,25;UBERON:0009856,6.26e-25,26;UBERON:0005172,6.13e-21,54;UBERON:0005173,6.13e-21,54;UBERON:0002365,6.56e-21,31;UBERON:0002330,6.56e-21,31;UBERON:0002417,8.27e-19,60;UBERON:0000916,8.27e-19,60;UBERON:0002368,1.62e-18,35;UBERON:0003929,4.02e-16,54;UBERON:0000949,2.19e-14,45;UBERON:0005177,5.40e-11,101;UBERON:0002530,6.08e-11,59;UBERON:0005911,1.64e-10,82;UBERON:0009569,7.29e-10,112;UBERON:0001041,2.34e-07,87;UBERON:0002110,2.63e-07,3;UBERON:0006242,2.63e-07,3;UBERON:0003914,3.00e-07,117;UBERON:0005256,6.20e-07,122;UBERON:0003104,9.87e-07,160;UBERON:0009142,9.87e-07,160 | |||
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|short_description=p4@HABP2 | |||
}} | }} |
Latest revision as of 11:50, 16 September 2015
Short description: | p4@HABP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HABP2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000541666_5end |
EntrezGene: | HABP2 |
HGNC: | 4798 |
UniProt: | B7Z8Q5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.71e-24 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 4.87e-35 | 25 |
anatomical boundary | 4.87e-35 | 25 |
hepatobiliary system | 4.87e-35 | 25 |
foregut-midgut junction | 4.87e-35 | 25 |
septum transversum | 4.87e-35 | 25 |
liver | 4.27e-34 | 19 |
digestive gland | 4.27e-34 | 19 |
liver bud | 4.27e-34 | 19 |
hepatic diverticulum | 1.86e-29 | 22 |
liver primordium | 1.86e-29 | 22 |
digestive tract diverticulum | 3.54e-28 | 23 |
epithelial sac | 6.31e-26 | 25 |
sac | 6.26e-25 | 26 |
abdomen element | 6.13e-21 | 54 |
abdominal segment element | 6.13e-21 | 54 |
exocrine gland | 6.56e-21 | 31 |
exocrine system | 6.56e-21 | 31 |
abdominal segment of trunk | 8.27e-19 | 60 |
abdomen | 8.27e-19 | 60 |
endocrine gland | 1.62e-18 | 35 |
gut epithelium | 4.02e-16 | 54 |
endocrine system | 2.19e-14 | 45 |
trunk region element | 5.40e-11 | 101 |
gland | 6.08e-11 | 59 |
endo-epithelium | 1.64e-10 | 82 |
subdivision of trunk | 7.29e-10 | 112 |
foregut | 2.34e-07 | 87 |
gallbladder | 2.63e-07 | 3 |
gall bladder primordium | 2.63e-07 | 3 |
epithelial tube | 3.00e-07 | 117 |
trunk mesenchyme | 6.20e-07 | 122 |
mesenchyme | 9.87e-07 | 160 |
entire embryonic mesenchyme | 9.87e-07 | 160 |