FFCP PHASE1:Hg19::chr11:16403910..16403933,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt=E9PN02 | |UniProt=E9PN02 | ||
|association_with_transcript=10bp_to_ENST00000526673_5end | |association_with_transcript=10bp_to_ENST00000526673_5end | ||
|cluster_id=chr11:16403910..16403933,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_12_at_SOX6_5end | |description=CAGE_peak_12_at_SOX6_5end | ||
|id=chr11:16403910..16403933,- | |id=chr11:16403910..16403933,- | ||
|ontology_enrichment_celltype=CL:0000764!4.14e-13!2;CL:0000765!4.14e-13!2;CL:0000050!4.14e-13!2;CL:0000038!4.14e-13!2;CL:0000558!4.14e-13!2;CL:0000547!4.14e-13!2;CL:0000549!4.14e-13!2;CL:0000550!4.14e-13!2;CL:0000552!4.14e-13!2 | |ontology_enrichment_celltype=CL:0000764!4.14e-13!2;CL:0000765!4.14e-13!2;CL:0000050!4.14e-13!2;CL:0000038!4.14e-13!2;CL:0000558!4.14e-13!2;CL:0000547!4.14e-13!2;CL:0000549!4.14e-13!2;CL:0000550!4.14e-13!2;CL:0000552!4.14e-13!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;8.70e-23;2!CL:0000558;8.70e-23;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.70e-23,2;CL:0000765,8.70e-23,2;CL:0000050,8.70e-23,2;CL:0000038,8.70e-23,2;CL:0000558,8.70e-23,2;CL:0000547,8.70e-23,2;CL:0000549,8.70e-23,2;CL:0000550,8.70e-23,2;CL:0000552,8.70e-23,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.17e-24!8;DOID:8692!5.27e-08!31 | |ontology_enrichment_disease=DOID:1036!1.17e-24!8;DOID:8692!5.27e-08!31 | ||
|ontology_enrichment_disease_v019=DOID:1036;9.54e-21;8!DOID:8692;3.30e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.24e-20,8;DOID:8692,3.52e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.20e-30!15;UBERON:0000179!4.20e-30!15;UBERON:0000463!4.20e-30!15;UBERON:0007023!1.43e-10!115;UBERON:0002106!2.70e-08!3;UBERON:0004854!2.70e-08!3;UBERON:0009034!2.70e-08!3;UBERON:0002095!2.70e-08!3;UBERON:0004782!2.70e-08!3;UBERON:0003281!2.70e-08!3;UBERON:0009664!2.70e-08!3;UBERON:0002296!2.70e-08!3;UBERON:0005602!2.70e-08!3;UBERON:0001179!2.70e-08!3;UBERON:0006293!2.70e-08!3;UBERON:0004177!1.52e-07!7;UBERON:0007029!6.38e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.18e-44;15!UBERON:0000179;3.18e-44;15!UBERON:0000463;3.18e-44;15!UBERON:0002390;5.06e-24;32!UBERON:0002193;6.14e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.77e-44,15;UBERON:0000179,2.77e-44,15;UBERON:0000463,2.77e-44,15;UBERON:0007023,1.07e-09,114;UBERON:0002390,1.68e-07,98;UBERON:0003061,1.68e-07,98 | |||
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|short_description=p12@SOX6 | |short_description=p12@SOX6 | ||
}} | }} |
Latest revision as of 22:59, 16 September 2015
Short description: | p12@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SOX6_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 10bp_to_ENST00000526673_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | E9PN02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.70e-23 | 2 |
erythroblast | 8.70e-23 | 2 |
megakaryocyte-erythroid progenitor cell | 8.70e-23 | 2 |
erythroid progenitor cell | 8.70e-23 | 2 |
reticulocyte | 8.70e-23 | 2 |
proerythroblast | 8.70e-23 | 2 |
basophilic erythroblast | 8.70e-23 | 2 |
polychromatophilic erythroblast | 8.70e-23 | 2 |
orthochromatic erythroblast | 8.70e-23 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.77e-44 | 15 |
haemolymphatic fluid | 2.77e-44 | 15 |
organism substance | 2.77e-44 | 15 |
adult organism | 1.07e-09 | 114 |
hematopoietic system | 1.68e-07 | 98 |
blood island | 1.68e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.24e-20 | 8 |
myeloid leukemia | 3.52e-08 | 31 |