FFCP PHASE1:Hg19::chr10:129346546..129346561,+: Difference between revisions
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|id=chr10:129346546..129346561,+
|short_description=p@chr10:129346546..129346561,+
|description=CAGE_peak_at_chr10:129346546..129346561,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:129346546..129346561,+ | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_at_chr10:129346546..129346561,+ | |||
|id=chr10:129346546..129346561,+ | |||
|ontology_enrichment_celltype=CL:0002586!8.99e-11!3;CL:0000149!2.11e-08!4;CL:0000306!2.26e-08!4;CL:0002222!2.26e-08!4;CL:0002224!2.26e-08!4;CL:0000243!1.25e-07!15;CL:0000125!1.25e-07!15;CL:0000030!1.25e-07!15;CL:0000339!1.25e-07!15;CL:0000095!6.38e-07!17;CL:0000123!6.38e-07!17 | |||
|ontology_enrichment_celltype_v019=CL:0000243;3.58e-07;15!CL:0000125;3.58e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,3.58e-07,15;CL:0000125,3.58e-07,15;CL:0000030,3.58e-07,15;CL:0000339,3.58e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.37e-10;10!CL:0000339;3.58e-07;15 | |||
|ontology_enrichment_disease=DOID:3093!2.03e-10!11;DOID:5409!1.70e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:3093;1.33e-09;11!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:3093,1.33e-09,11;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0000966!2.02e-23!5;UBERON:0005388!2.02e-23!5;UBERON:0001802!2.02e-23!5;UBERON:0001905!1.54e-15!2;UBERON:0002757!1.54e-15!2;UBERON:0010134!1.54e-15!2;UBERON:0002784!1.54e-15!2;UBERON:0005408!1.54e-15!2;UBERON:0001899!1.54e-15!2;UBERON:0000019!4.74e-14!19;UBERON:0000047!4.74e-14!19;UBERON:0004088!4.74e-14!19;UBERON:0003072!4.74e-14!19;UBERON:0003071!4.74e-14!19;UBERON:0004128!4.74e-14!19;UBERON:0000970!2.19e-13!20;UBERON:0002104!8.73e-13!21;UBERON:0001456!8.73e-13!21;UBERON:0000020!9.74e-12!23;UBERON:0001032!2.80e-11!24;UBERON:0004456!2.80e-11!24;UBERON:0007625!2.83e-11!11;UBERON:0001781!8.99e-11!3;UBERON:0001782!8.99e-11!3;UBERON:0005424!8.99e-11!3;UBERON:0005085!1.87e-09!29;UBERON:0003296!1.96e-08!4;UBERON:0010133!1.96e-08!4;UBERON:0010077!2.26e-08!4;UBERON:0005389!2.26e-08!4;UBERON:0000484!2.26e-08!4;UBERON:0002546!2.26e-08!4;UBERON:0000965!2.26e-08!4;UBERON:0001803!2.26e-08!4;UBERON:0003073!2.26e-08!4;UBERON:0005426!2.26e-08!4;UBERON:0003056!9.09e-08!61;UBERON:0002118!6.39e-07!5;UBERON:0004532!6.39e-07!5 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr10:129346546..129346561,+ | |||
}} | }} |
Latest revision as of 11:35, 23 July 2015
Short description: | p@chr10:129346546..129346561, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129346546..129346561, + |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 3.58e-07 | 15 |
glial cell | 3.58e-07 | 15 |
glioblast | 3.58e-07 | 15 |
glioblast (sensu Vertebrata) | 3.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
nervous system cancer | 1.33e-09 | 11 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |