FFCP PHASE1:Mm9::chr8:108027098..108027102,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:108027098..108027102,+ | |||
|description=CAGE_peak_at_chr8:108027098..108027102,+ | |description=CAGE_peak_at_chr8:108027098..108027102,+ | ||
|id=chr8:108027098..108027102,+ | |id=chr8:108027098..108027102,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002092,2.11e-08,3;CL:0002540,2.11e-08,3;CL:0002320,3.86e-07,46;CL:0000134,3.86e-07,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.42e-08,23;UBERON:0009856,1.42e-08,23;UBERON:0002371,1.61e-08,16;UBERON:0001474,1.82e-07,22;UBERON:0004765,1.82e-07,22;UBERON:0001434,1.82e-07,22;UBERON:0002107,2.90e-07,22;UBERON:0007499,2.90e-07,22;UBERON:0006925,2.90e-07,22;UBERON:0009497,2.90e-07,22;UBERON:0000015,2.90e-07,22;UBERON:0002423,2.90e-07,22;UBERON:0006235,2.90e-07,22;UBERON:0008835,2.90e-07,22;UBERON:0003894,2.90e-07,22;UBERON:0004161,2.90e-07,22;UBERON:0008836,2.90e-07,22;UBERON:0002384,3.86e-07,46;UBERON:0002204,6.60e-07,32 | |||
|phase1_expression=0,0,0,0.90739263392049,0.500895729946347,0,1.40167584357315,0.258246646883153,0.563154888606667,0.936258105287974,0.513653904676515,0.159544317990673,0.171200729931206,0.174840804837995,0.333109761815663,1.82227740650843,0,0.630924330716475,0.274228867211478,1.27316895539409,0.340173160604279,0,0.261199789138935,2.23989391910769,0.68822784320151,0,0,0,1.33016393619462,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,0.506884656097573,1.10128051297009,2.34717403304412,0.218025156380447,0.439372365468944,0.388859798148567,0,0,0.503347818173209,0,0.336093799142464,0,0.573066879877513,0,0.404632921719196,0,0,1.0165335962074,0.889294796111139,2.6996991518442,1.97773272513395,2.1314403448383,0.898800331555214,1.92109152660777,0.311068836925433,0.540023753326763,0.210324961351382,0,0,0.122490799214954,0.287536413054709,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0,0.832988126665025,0.906858721281426,0.289864488701678,2.58127163094416,0.679971333707751,1.07940638327563,0,2.68816132258401,1.40444420131752,0.681721290312231,2.85764605063156,1.41335829804136,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,1.02765491747154,0.258937883647172,0.445326417194474,0.346970653532272,1.21786191324856,0.461230994512117,0.150722640552623,0.587943535678524,0,0.494389935468748,0.144599356919912,2.65383165584962,0.970601099684455,0,0,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,0.149790639404823,0,0.125654352112864,0,0.511430914660661,0,0.324482526135515,0.101839363850316,0.497627882440372,0,0.210441855886474,0.390361328888111,0.689706313300419,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,0,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0,0,0,0.219550115291051,0.402619256281115,0,0.102904612379284,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,2.30578536613615,0.502670417600539,0.795825888164603,0.38992817423824,0,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0.775809948670503,0.280543279561274,0.316182685621286,0.590440591918409,0.470996183524124,0.863780147452604,1.48226313543574,0.333690211432188,0.786235980452812,0.899448449539415,0.202860121388503,0,0.50925170356284,0.287696137450811,0.972811360650212,1.64736847912849,0,1.11642284300551,0.624075346229121,1.51547326768267,3.76734568396016,1.92977408545347,0.554259570499814,0.189491411770485,0.488894929326078,1.01847051465113,0,0.335012514883631,0,0.195133647857799,0.472905432318573,0.221464689648775,0,0.655453258862952,0.345369963731791,0.433947175744535,1.50791283939272,1.63171705145613,0,0.551873492609465,0,0,1.14754461763673,0,0,1.17131623288992,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0,0,0.712262414669021,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,0,0.36012218806262,0.388076051348264,0.428674070063185,0.177340233642274,0,0.658196082408484,0.608929898229199,0.704015124191131,0.63549621259146,0.441056796109924,0.16488625294148,0.484393280087717,0.0603129249281559,0.238744688006273,0,1.1659233465194,0,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0.686334519619568,0,0,0,0.954670618015114,0.474503990371703,0.406638934253697,0,0,0,0.404593039154462,0.330613822901344,1.04702376793612,0.388844919875379,0,0,0.299033092087958,0.330916980914195,0,0,0.506868376472335,0.352071715937262,0,0.314578033277133,0,0,0,0.202725215290164,0,0.25984164595559,0,0.39736270956253,0.480781798079875,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.194915761479505,0,0.116876902181569,0,0.665957860122194,0.62799699626633,0.671538465456314,0.19318959403219,0.563047426353546,0.36630324853453,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0.726511433089237,0,0.682934423016537,0.243106717068294,0.419226325255965,0.735374033800057,0.222246727801615,0,0,0,0.25347929989024,0,0.468207537349412,0.320125762024346,0,0.476293691283074,0.231768651889711,0.192909220463705,1.23625770240992,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.73171189149109,0,0.135804113845862,0.561142271657738,0.593175090620871,0,0.818462086339379,0.464810523557898,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0.90739263392049,0.500895729946347,0,1.40167584357315,0.258246646883153,0.563154888606667,0.936258105287974,0.513653904676515,0.159544317990673,0.171200729931206,0.174840804837995,0.333109761815663,1.82227740650843,0,0.630924330716475,0.274228867211478,1.27316895539409,0.340173160604279,0,0.261199789138935,2.23989391910769,0.68822784320151,0,0,0,1.33016393619462,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.6366586336825,0.506884656097573,1.10128051297009,2.34717403304412,0.218025156380447,0.439372365468944,0.388859798148567,0,0,0.503347818173209,0,0.336093799142464,0,0.573066879877513,0,0.404632921719196,0,0,1.0165335962074,0.889294796111139,2.6996991518442,1.97773272513395,2.1314403448383,0.898800331555214,1.92109152660777,0.311068836925433,0.540023753326763,0.210324961351382,0,0,0.122490799214954,0.287536413054709,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0.284743361598206,0,0.832988126665025,0.906858721281426,0.289864488701678,2.58127163094416,0.679971333707751,1.07940638327563,0,2.68816132258401,1.40444420131752,0.681721290312231,2.85764605063156,1.41335829804136,0,0,0,0,0.432982082022428,0.506719730950197,0.505524445014783,1.02765491747154,0.258937883647172,0.445326417194474,0.346970653532272,1.21786191324856,0.461230994512117,0.150722640552623,0.587943535678524,0,0.494389935468748,0.144599356919912,2.65383165584962,0.970601099684455,0,0,1.86391761218122,0.292780797011547,0,0.255457055208591,0,0,0,0.149790639404823,0,0.125654352112864,0,0.511430914660661,0,0.324482526135515,0.101839363850316,0.497627882440372,0,0.210441855886474,0.390361328888111,0.689706313300419,0.180062129805349,0.150704817835715,0.340182495756639,0.12811372028485,0.281105173679186,0,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0.411564272815887,0,0,0,0,0,0,0.36012412292203,0,0.196764231747404,0,0,0,0.116765342367169,0.329119699826961,0,0,0,0.219550115291051,0.402619256281115,0,0.102904612379284,0.330418782983798,0,0,0.464473343720877,0.128867461322093,0.201683524623343,0,0,0,2.30578536613615,0.502670417600539,0.795825888164603,0.38992817423824,0,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,0,0.203651327845314,0.775809948670503,0.280543279561274,0.316182685621286,0.590440591918409,0.470996183524124,0.863780147452604,1.48226313543574,0.333690211432188,0.786235980452812,0.899448449539415,0.202860121388503,0,0.50925170356284,0.287696137450811,0.972811360650212,1.64736847912849,0,1.11642284300551,0.624075346229121,1.51547326768267,3.76734568396016,1.92977408545347,0.554259570499814,0.189491411770485,0.488894929326078,1.01847051465113,0,0.335012514883631,0,0.195133647857799,0.472905432318573,0.221464689648775,0,0.655453258862952,0.345369963731791,0.433947175744535,1.50791283939272,1.63171705145613,0,0.551873492609465,0,0,1.14754461763673,0,0,1.17131623288992,0.430846795465598,0.238968797952552,0.445597348164788,0,0,0.876767573733936,0.395287777946524,0,0,0.712262414669021,0,0,0,0.242780636154981,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,1.03135543248187,0,0.36012218806262,0.388076051348264,0.428674070063185,0.177340233642274,0,0.658196082408484,0.608929898229199,0.704015124191131,0.63549621259146,0.441056796109924,0.16488625294148,0.484393280087717,0.0603129249281559,0.238744688006273,0,1.1659233465194,0,0.341741761595705,0.206386867963223,0.370389054739423,0,0.136694227721025,0.686334519619568,0,0,0,0.954670618015114,0.474503990371703,0.406638934253697,0,0,0,0.404593039154462,0.330613822901344,1.04702376793612,0.388844919875379,0,0,0.299033092087958,0.330916980914195,0,0,0.506868376472335,0.352071715937262,0,0.314578033277133,0,0,0,0.202725215290164,0,0.25984164595559,0,0.39736270956253,0.480781798079875,0,0.201932899896295,0.0762068066549998,0.201652370273681,0.194915761479505,0,0.116876902181569,0,0.665957860122194,0.62799699626633,0.671538465456314,0.19318959403219,0.563047426353546,0.36630324853453,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0.726511433089237,0,0.682934423016537,0.243106717068294,0.419226325255965,0.735374033800057,0.222246727801615,0,0,0,0.25347929989024,0,0.468207537349412,0.320125762024346,0,0.476293691283074,0.231768651889711,0.192909220463705,1.23625770240992,0.147198920134397,0,0.177475806159338,0.238436189947321,0.290692833264657,0.282328141245992,0.169229215783353,0.73171189149109,0,0.135804113845862,0.561142271657738,0.593175090620871,0,0.818462086339379,0.464810523557898,0,0.749431733813838,0.233931608445408,0,0.191288332068843,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr8:108027098..108027102,+ | |short_description=p@chr8:108027098..108027102,+ | ||
}} | }} |
Latest revision as of 19:55, 5 August 2015
Short description: | p@chr8:108027098..108027102, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:108027098..108027102, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 2.11e-08 | 3 |
mesenchymal stem cell of the bone marrow | 2.11e-08 | 3 |
connective tissue cell | 3.86e-07 | 46 |
mesenchymal cell | 3.86e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.42e-08 | 23 |
sac | 1.42e-08 | 23 |
bone marrow | 1.61e-08 | 16 |
bone element | 1.82e-07 | 22 |
skeletal element | 1.82e-07 | 22 |
skeletal system | 1.82e-07 | 22 |
liver | 2.90e-07 | 22 |
epithelial sac | 2.90e-07 | 22 |
digestive gland | 2.90e-07 | 22 |
epithelium of foregut-midgut junction | 2.90e-07 | 22 |
anatomical boundary | 2.90e-07 | 22 |
hepatobiliary system | 2.90e-07 | 22 |
foregut-midgut junction | 2.90e-07 | 22 |
hepatic diverticulum | 2.90e-07 | 22 |
liver primordium | 2.90e-07 | 22 |
septum transversum | 2.90e-07 | 22 |
liver bud | 2.90e-07 | 22 |
connective tissue | 3.86e-07 | 46 |
musculoskeletal system | 6.60e-07 | 32 |