FFCP PHASE1:Hg19::chr16:22385801..22385834,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1039 | |EntrezGene=1039 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1799 | |HGNC=1799 | ||
|TSSclassifier=strong | |||
|UniProt=Q01850 | |UniProt=Q01850 | ||
|association_with_transcript=103bp_to_ENST00000268383,NM_001802,uc002dkn.2_5end | |association_with_transcript=103bp_to_ENST00000268383,NM_001802,uc002dkn.2_5end | ||
|cluster_id=chr16:22385801..22385834,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_CDR2_5end | |description=CAGE_peak_3_at_CDR2_5end | ||
|id=chr16:22385801..22385834,- | |id=chr16:22385801..22385834,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.82e-21;1!CL:0002625;2.82e-21;1!CL:0000216;2.82e-21;1!CL:0000228;5.71e-21;1!CL:0002372;5.71e-21;1!CL:0000771;3.52e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.82e-21,1;CL:0002625,2.82e-21,1;CL:0000216,2.82e-21,1;CL:0000228,3.45e-21,1;CL:0002372,3.45e-21,1;CL:0000771,3.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.03e-23;8!UBERON:0001136;2.82e-21;1!UBERON:0001343;2.82e-21;1!UBERON:0004910;2.82e-21;1!UBERON:0004813;2.82e-21;1!UBERON:0003135;4.11e-17;11!UBERON:0004909;2.47e-11;2!UBERON:0000991;2.83e-09;21!UBERON:0003101;7.02e-09;22!UBERON:0000079;7.02e-09;22!UBERON:0002114;7.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.03e-23,8;UBERON:0001136,2.82e-21,1;UBERON:0001343,2.82e-21,1;UBERON:0004910,2.82e-21,1;UBERON:0005154,2.82e-21,1;UBERON:0005295,2.82e-21,1;UBERON:0004813,2.82e-21,1;UBERON:0005297,2.82e-21,1;UBERON:0005294,2.82e-21,1;UBERON:0010141,2.82e-21,1;UBERON:0005891,2.82e-21,1;UBERON:0003135,4.11e-17,11;UBERON:0004909,2.47e-11,2;UBERON:0000991,2.83e-09,21;UBERON:0009196,2.83e-09,21;UBERON:0009117,2.83e-09,21;UBERON:0005564,2.83e-09,21;UBERON:0004176,7.02e-09,22;UBERON:0003101,7.02e-09,22;UBERON:0000079,7.02e-09,22;UBERON:0002114,7.76e-08,2 | |||
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| ||
|short_description=p3@CDR2 | |short_description=p3@CDR2 | ||
}} | }} |
Latest revision as of 05:13, 25 September 2015
Short description: | p3@CDR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDR2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 103bp_to_ENST00000268383, NM_001802, uc002dkn.2_5end |
EntrezGene: | CDR2 |
HGNC: | 1799 |
UniProt: | Q01850 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.82e-21 | 1 |
seminiferous tubule epithelial cell | 2.82e-21 | 1 |
Sertoli cell | 2.82e-21 | 1 |
multinucleate cell | 3.45e-21 | 1 |
myotube | 3.45e-21 | 1 |
eosinophil | 3.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 3.03e-23 | 8 |
mesothelium | 2.82e-21 | 1 |
seminiferous tubule of testis | 2.82e-21 | 1 |
epithelium of male gonad | 2.82e-21 | 1 |
epithelial cord | 2.82e-21 | 1 |
sex cord | 2.82e-21 | 1 |
seminiferous tubule epithelium | 2.82e-21 | 1 |
testis sex cord | 2.82e-21 | 1 |
genital ridge | 2.82e-21 | 1 |
primitive sex cord of indifferent gonad | 2.82e-21 | 1 |
coelomic epithelium | 2.82e-21 | 1 |
male reproductive organ | 4.11e-17 | 11 |
epithelium of gonad | 2.47e-11 | 2 |
gonad | 2.83e-09 | 21 |
indifferent external genitalia | 2.83e-09 | 21 |
indifferent gonad | 2.83e-09 | 21 |
gonad primordium | 2.83e-09 | 21 |
external genitalia | 7.02e-09 | 22 |
male organism | 7.02e-09 | 22 |
male reproductive system | 7.02e-09 | 22 |
duodenum | 7.76e-08 | 2 |