FFCP PHASE1:Hg19::chr16:27225989..27225998,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79831 | |EntrezGene=79831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25840 | |HGNC=25840 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=56bp_to_uc010bxx.2_5end | |association_with_transcript=56bp_to_uc010bxx.2_5end | ||
|cluster_id=chr16:27225989..27225998,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_JMJD5_5end | |description=CAGE_peak_7_at_JMJD5_5end | ||
|id=chr16:27225989..27225998,+ | |id=chr16:27225989..27225998,+ | ||
|ontology_enrichment_celltype=CL:0000181!2.31e-24!12;CL:0000417!2.31e-24!12;CL:0000668!2.31e-24!12;CL:0000414!2.31e-24!12;CL:0000412!2.31e-24!12;CL:0000182!2.31e-24!12 | |ontology_enrichment_celltype=CL:0000181!2.31e-24!12;CL:0000417!2.31e-24!12;CL:0000668!2.31e-24!12;CL:0000414!2.31e-24!12;CL:0000412!2.31e-24!12;CL:0000182!2.31e-24!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.57e-17;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.57e-17,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.79e-24!19;UBERON:0006925!6.79e-24!19;UBERON:0008836!6.79e-24!19;UBERON:0008835!1.15e-20!22;UBERON:0003894!1.15e-20!22;UBERON:0009854!8.93e-20!23;UBERON:0007499!3.30e-18!25;UBERON:0009497!3.30e-18!25;UBERON:0000015!3.30e-18!25;UBERON:0002423!3.30e-18!25;UBERON:0006235!3.30e-18!25;UBERON:0004161!3.30e-18!25;UBERON:0005057!1.63e-17!26;UBERON:0009856!1.63e-17!26;UBERON:0002365!1.03e-14!31;UBERON:0002330!1.03e-14!31;UBERON:0002368!4.79e-13!35;UBERON:0000949!3.64e-10!45;UBERON:0003929!1.78e-08!54;UBERON:0005172!2.53e-08!55;UBERON:0005173!2.53e-08!55;UBERON:0002530!9.26e-08!59;UBERON:0002417!1.66e-07!61;UBERON:0000916!1.66e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.73e-24;19!UBERON:0006925;2.73e-24;19!UBERON:0002423;1.02e-18;25!UBERON:0002365;9.12e-16;31!UBERON:0002330;9.12e-16;31!UBERON:0002368;4.88e-12;33!UBERON:0002108;3.60e-11;4!UBERON:0000949;2.02e-10;43!UBERON:0005172;1.88e-08;52!UBERON:0005173;1.88e-08;52!UBERON:0001007;2.99e-08;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0002108,3.60e-11,4;UBERON:0000949,7.94e-11,45;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60;UBERON:0004921,1.75e-07,118 | |||
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|short_description=p7@JMJD5 | |short_description=p7@JMJD5 | ||
}} | }} |
Latest revision as of 21:09, 15 September 2015
Short description: | p7@JMJD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_JMJD5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 56bp_to_uc010bxx.2_5end |
EntrezGene: | JMJD5 |
HGNC: | 25840 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.57e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.73e-24 | 19 |
digestive gland | 2.73e-24 | 19 |
liver bud | 2.73e-24 | 19 |
hepatic diverticulum | 3.99e-21 | 22 |
liver primordium | 3.99e-21 | 22 |
digestive tract diverticulum | 2.97e-20 | 23 |
epithelial sac | 1.02e-18 | 25 |
epithelium of foregut-midgut junction | 1.02e-18 | 25 |
anatomical boundary | 1.02e-18 | 25 |
hepatobiliary system | 1.02e-18 | 25 |
foregut-midgut junction | 1.02e-18 | 25 |
septum transversum | 1.02e-18 | 25 |
sac | 4.90e-18 | 26 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
endocrine gland | 1.18e-13 | 35 |
small intestine | 3.60e-11 | 4 |
endocrine system | 7.94e-11 | 45 |
gut epithelium | 3.61e-09 | 54 |
abdomen element | 3.61e-09 | 54 |
abdominal segment element | 3.61e-09 | 54 |
gland | 1.83e-08 | 59 |
abdominal segment of trunk | 2.45e-08 | 60 |
abdomen | 2.45e-08 | 60 |
subdivision of digestive tract | 1.75e-07 | 118 |