FFCP PHASE1:Hg19::chr11:64612091..64612116,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55561 | |EntrezGene=55561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29829 | |HGNC=29829 | ||
|TSSclassifier=strong | |||
|UniProt=Q6DT37 | |UniProt=Q6DT37 | ||
|association_with_transcript=-50bp_to_ENST00000342711,NM_017525,uc001obs.3_5end | |association_with_transcript=-50bp_to_ENST00000342711,NM_017525,uc001obs.3_5end | ||
|cluster_id=chr11:64612091..64612116,- | |||
|description=CAGE_peak_3_at_CDC42BPG_5end | |description=CAGE_peak_3_at_CDC42BPG_5end | ||
|id=chr11:64612091..64612116,- | |id=chr11:64612091..64612116,- | ||
|ontology_enrichment_celltype=CL:0000066!3.09e-23!254;CL:0002076!5.03e-19!43;CL:0000223!3.55e-18!59;CL:0002251!2.92e-14!21 | |ontology_enrichment_celltype=CL:0000066!3.09e-23!254;CL:0002076!5.03e-19!43;CL:0000223!3.55e-18!59;CL:0002251!2.92e-14!21 | ||
|ontology_enrichment_celltype_v019=CL:0000349;8.31e-11;19!CL:0000575;2.91e-10;2!CL:0002537;8.83e-09;5!CL:0002541;4.15e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.90e-11,19;CL:0000575,1.68e-10,2;CL:0002537,4.72e-09,5;CL:0000223,3.46e-07,58;CL:0002541,3.48e-07,3;CL:0002076,4.28e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.45e-19!106;DOID:0050687!1.85e-13!143;DOID:1749!5.67e-12!14;DOID:299!1.58e-08!25 | |ontology_enrichment_disease=DOID:305!4.45e-19!106;DOID:0050687!1.85e-13!143;DOID:1749!5.67e-12!14;DOID:299!1.58e-08!25 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.35e-11;4!DOID:1612;2.35e-11;4!DOID:299;3.78e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.59e-11,4;DOID:1612,2.59e-11,4;DOID:299,5.77e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.26e-20!169;UBERON:0000925!2.26e-20!169;UBERON:0006595!2.26e-20!169;UBERON:0001007!1.71e-15!155;UBERON:0001555!1.71e-15!155;UBERON:0007026!1.71e-15!155;UBERON:0004921!1.86e-12!129;UBERON:0004185!1.86e-12!129;UBERON:0000077!2.70e-12!130;UBERON:0001004!4.42e-11!72;UBERON:0005631!5.40e-10!14;UBERON:0000158!5.40e-10!14;UBERON:0000464!8.62e-10!104;UBERON:0000466!1.67e-09!126;UBERON:0000344!1.12e-08!12;UBERON:0000161!1.28e-08!35;UBERON:0005911!1.37e-08!82;UBERON:0001041!2.03e-08!98;UBERON:0000166!3.16e-08!21;UBERON:0003729!6.65e-07!5;UBERON:0000974!8.61e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.68e-16;10!UBERON:0000158;6.68e-16;10!UBERON:0000478;6.01e-11;24!UBERON:0000305;1.49e-10;7!UBERON:0000974;3.47e-07;6!UBERON:0003124;4.15e-07;3!UBERON:0000920;4.15e-07;3!UBERON:0002110;7.80e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,7.97e-20,14;UBERON:0000158,7.97e-20,14;UBERON:0000478,5.05e-11,24;UBERON:0003124,8.85e-11,7;UBERON:0000305,1.08e-10,7;UBERON:0004871,2.31e-09,8;UBERON:0000920,3.48e-07,3;UBERON:0002110,6.75e-07,3;UBERON:0006242,6.75e-07,3 | |||
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| ||
|short_description=p3@CDC42BPG | |short_description=p3@CDC42BPG | ||
}} | }} |
Latest revision as of 04:46, 19 September 2015
Short description: | p3@CDC42BPG |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CDC42BPG_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000342711, NM_017525, uc001obs.3_5end |
EntrezGene: | CDC42BPG |
HGNC: | 29829 |
UniProt: | Q6DT37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.90e-11 | 19 |
corneal epithelial cell | 1.68e-10 | 2 |
amnion mesenchymal stem cell | 4.72e-09 | 5 |
endodermal cell | 3.46e-07 | 58 |
chorionic membrane mesenchymal stem cell | 3.48e-07 | 3 |
endo-epithelial cell | 4.28e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 7.97e-20 | 14 |
membranous layer | 7.97e-20 | 14 |
extraembryonic structure | 5.05e-11 | 24 |
chorion | 8.85e-11 | 7 |
amnion | 1.08e-10 | 7 |
somatic layer of lateral plate mesoderm | 2.31e-09 | 8 |
egg chorion | 3.48e-07 | 3 |
gallbladder | 6.75e-07 | 3 |
gall bladder primordium | 6.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.59e-11 | 4 |
breast cancer | 2.59e-11 | 4 |
adenocarcinoma | 5.77e-08 | 25 |