FFCP PHASE1:Hg19::chr11:70962884..70962930,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:70962884..70962930,- | |||
|description=CAGE_peak_at_chr11:70962884..70962930,- | |description=CAGE_peak_at_chr11:70962884..70962930,- | ||
|id=chr11:70962884..70962930,- | |id=chr11:70962884..70962930,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.79e-15;5!CL:0002321;3.23e-11;15!CL:0000182;4.79e-11;12!CL:1000507;3.57e-07;10!CL:1000494;3.57e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.85e-15,5;CL:0000182,2.70e-11,12;CL:1000507,3.38e-07,10;CL:1000494,3.38e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.80e-12;11!UBERON:0009497;4.09e-10;13!UBERON:0003104;1.48e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009856!4.42e-10!26;UBERON:0000481!6.58e-10!347;UBERON:0002417!9.55e-10!61;UBERON:0000916!9.55e-10!61;UBERON:0004119!9.69e-10!169;UBERON:0000925!9.69e-10!169;UBERON:0006595!9.69e-10!169;UBERON:0000475!1.03e-09!365;UBERON:0007499!1.36e-09!25;UBERON:0009854!1.40e-09!23;UBERON:0005172!1.57e-09!55;UBERON:0005173!1.57e-09!55;UBERON:0001007!2.87e-09!155;UBERON:0001555!2.87e-09!155;UBERON:0007026!2.87e-09!155;UBERON:0008835!4.33e-09!22;UBERON:0003894!4.33e-09!22;UBERON:0005177!9.39e-09!107;UBERON:0004921!2.44e-08!129;UBERON:0004185!2.44e-08!129;UBERON:0003076!2.74e-08!15;UBERON:0003057!2.74e-08!15;UBERON:0009497!3.50e-08!25;UBERON:0000015!3.50e-08!25;UBERON:0002423!3.50e-08!25;UBERON:0006235!3.50e-08!25;UBERON:0004161!3.50e-08!25;UBERON:0005409!4.33e-08!35;UBERON:0000466!6.04e-08!126;UBERON:0000160!1.66e-07!27;UBERON:0002107!2.04e-07!19;UBERON:0006925!2.04e-07!19;UBERON:0008836!2.04e-07!19;UBERON:0002365!3.73e-07!31;UBERON:0002330!3.73e-07!31;UBERON:0000468!4.13e-07!659;UBERON:0000922!4.56e-07!612;UBERON:0000062!6.32e-07!511 | |ontology_enrichment_uberon=UBERON:0009856!4.42e-10!26;UBERON:0000481!6.58e-10!347;UBERON:0002417!9.55e-10!61;UBERON:0000916!9.55e-10!61;UBERON:0004119!9.69e-10!169;UBERON:0000925!9.69e-10!169;UBERON:0006595!9.69e-10!169;UBERON:0000475!1.03e-09!365;UBERON:0007499!1.36e-09!25;UBERON:0009854!1.40e-09!23;UBERON:0005172!1.57e-09!55;UBERON:0005173!1.57e-09!55;UBERON:0001007!2.87e-09!155;UBERON:0001555!2.87e-09!155;UBERON:0007026!2.87e-09!155;UBERON:0008835!4.33e-09!22;UBERON:0003894!4.33e-09!22;UBERON:0005177!9.39e-09!107;UBERON:0004921!2.44e-08!129;UBERON:0004185!2.44e-08!129;UBERON:0003076!2.74e-08!15;UBERON:0003057!2.74e-08!15;UBERON:0009497!3.50e-08!25;UBERON:0000015!3.50e-08!25;UBERON:0002423!3.50e-08!25;UBERON:0006235!3.50e-08!25;UBERON:0004161!3.50e-08!25;UBERON:0005409!4.33e-08!35;UBERON:0000466!6.04e-08!126;UBERON:0000160!1.66e-07!27;UBERON:0002107!2.04e-07!19;UBERON:0006925!2.04e-07!19;UBERON:0008836!2.04e-07!19;UBERON:0002365!3.73e-07!31;UBERON:0002330!3.73e-07!31;UBERON:0000468!4.13e-07!659;UBERON:0000922!4.56e-07!612;UBERON:0000062!6.32e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.86e-12;31!UBERON:0002330;1.86e-12;31!UBERON:0002107;8.12e-11;19!UBERON:0006925;8.12e-11;19!UBERON:0005172;1.50e-08;52!UBERON:0005173;1.50e-08;52!UBERON:0002423;8.13e-08;25!UBERON:0002368;1.97e-07;33!UBERON:0004211;3.57e-07;10!UBERON:0009773;3.57e-07;10!UBERON:0001231;3.57e-07;10!UBERON:0004810;3.57e-07;10!UBERON:0001829;8.79e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.95e-13,31;UBERON:0002330,5.95e-13,31;UBERON:0005172,1.43e-11,54;UBERON:0005173,1.43e-11,54;UBERON:0002107,6.02e-11,19;UBERON:0006925,6.02e-11,19;UBERON:0008836,6.02e-11,19;UBERON:0002417,5.27e-10,60;UBERON:0000916,5.27e-10,60;UBERON:0008835,3.22e-09,22;UBERON:0003894,3.22e-09,22;UBERON:0002530,7.98e-09,59;UBERON:0009854,9.60e-09,23;UBERON:0007499,6.55e-08,25;UBERON:0009497,6.55e-08,25;UBERON:0000015,6.55e-08,25;UBERON:0002423,6.55e-08,25;UBERON:0006235,6.55e-08,25;UBERON:0004161,6.55e-08,25;UBERON:0002368,6.72e-08,35;UBERON:0009856,1.53e-07,26;UBERON:0003929,1.93e-07,54;UBERON:0004810,3.38e-07,10;UBERON:0001829,6.97e-07,2 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0.369363174230364,1.83600622119828,0,0.286235987131057,0,0,0,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,3.40855682553327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,1.02077085627447,0.122834317311768,0.309977343527296,0,0,0.910161361938026,0,0,0.250237039743928,0,1.75591048352335,0,0,0,0,0,0,0,0,1.03056216018252,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0,3.29329006549908,2.25300606146525,2.09149097165133,2.38420426535352,1.7662459561294,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.77236972004421,0,2.82873408649161,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,1.15825045334063,1.64381058040307,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,2.14114786556594,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0.511707249066704,0.321707842287215,0,0,0,0.0821271560138091,0,0.232420756919918,2.29632954224082,0.40101294060657,0,0.114814448164607,0,0,1.35359883872224,0.231046011313244,0,4.38417673959782,0.316654886678627,0,0,0,0,1.35473218771926,1.50506932156456,0.509752546090077,3.3243040357149,0.447749509444357,0,0,0.256450125116389,0.656029291399411,0,0.309123034943167,0,0,0,0,0,0.386682873168488,0,0,0.137836572484531,0,0,0.0852266274161009,0.445160178233687,0,0.192190067365106,0.510450849978337,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,1.09814811894422,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0,0.276283915531148,0,11.1472863927349,0.123084805461069,0.311039587661807,0.269605053441981,0.895105873378046,0,0,0,2.22273980289274,0,0.0927680981618513,0,1.30213880542617,1.83665999992011,0,0.455173793141999,0.254253650292766,0,3.44743373241465,0,0,0,0,0,5.97128003628613,4.13766666534966,1.09692698576986,0.21787692703798,0.278847488557207,0,0,0,0.897576444097721,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0.19606253431774,0,0,0,0,0.326465616318295,0.282706142867882,0,2.98578579323551,0.442287822516696,0.611030144933625,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0.242780379534093,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0,0,1.12990370390266,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,1.96957955768059,1.97798060114799,2.56133466645903,6.88992370603241,0,0,0,2.41129722697529,4.67634084430595,2.07720169014593,0,0,0.0607495566580247,2.68347750079413,1.10327990218877,5.03564046095982,0,4.84075816198681,0.191915197319445,0,0,0,0,0,0,0,0,0,0,1.02586563574658,2.65013777824443,0.129282956361551,0.13223260174269,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,2.29363678276028,0.665574309221114,0.372578417648301,0,0.74988244777264,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,1.79369063011563,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,1.02315497042921,0,0,0,0,2.12574920101683,0.991486114072017,0,0,0,0,0,1.2249819094128,0.256916900385838,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0.588886311006154,0,0.183428598521679,0,0,0,0.397832444232549,0,0,0.781514011233092,0.261906694481422,0,0.295712172434091,0.0675375846183947,0,0,0,0,2.74128883428591,0,0,0.255524855279191,0,0,0,0.227662191351298,1.24183318227694,0,0,0.203909198930495,0.197318320688547,0,0,0,0.157115589916002,0,2.73947616152849,0.863710364874486,2.8665101273223,3.57382720883282,0.158013611732727,0,0.173858272302579,0,0,0.17071847709395,0,1.29068207646083,0,0,0.423387050190929,0,0,0,3.69122924932715,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0.549702583727146,0,0.463044948647668,1.96703604453562,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0.169927114687817,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0.160482733378337,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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.737201809504527,0,0,0,0.37129905888014,0.994192127183747,0,0,0,0,0.369363174230364,1.83600622119828,0,0.286235987131057,0,0,0,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,3.40855682553327,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.579386075843295,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.149448680551801,0,0,0,1.02077085627447,0.122834317311768,0.309977343527296,0,0,0.910161361938026,0,0,0.250237039743928,0,1.75591048352335,0,0,0,0,0,0,0,0,1.03056216018252,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0,3.29329006549908,2.25300606146525,2.09149097165133,2.38420426535352,1.7662459561294,3.28479623168247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,1.77236972004421,0,2.82873408649161,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,1.15825045334063,1.64381058040307,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,2.14114786556594,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0.248107807818777,0,0,0,0.511707249066704,0.321707842287215,0,0,0,0.0821271560138091,0,0.232420756919918,2.29632954224082,0.40101294060657,0,0.114814448164607,0,0,1.35359883872224,0.231046011313244,0,4.38417673959782,0.316654886678627,0,0,0,0,1.35473218771926,1.50506932156456,0.509752546090077,3.3243040357149,0.447749509444357,0,0,0.256450125116389,0.656029291399411,0,0.309123034943167,0,0,0,0,0,0.386682873168488,0,0,0.137836572484531,0,0,0.0852266274161009,0.445160178233687,0,0.192190067365106,0.510450849978337,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,1.09814811894422,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.281338832821026,0,0,0,0,0.276283915531148,0,11.1472863927349,0.123084805461069,0.311039587661807,0.269605053441981,0.895105873378046,0,0,0,2.22273980289274,0,0.0927680981618513,0,1.30213880542617,1.83665999992011,0,0.455173793141999,0.254253650292766,0,3.44743373241465,0,0,0,0,0,5.97128003628613,4.13766666534966,1.09692698576986,0.21787692703798,0.278847488557207,0,0,0,0.897576444097721,0.217294743844016,0,0.183195186803725,0,0,0,0,0,0.19606253431774,0,0,0,0,0.326465616318295,0.282706142867882,0,2.98578579323551,0.442287822516696,0.611030144933625,0,0,0,0.606610196826093,0,0.234264445725339,0,0,0.242780379534093,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,0,0.173559738335131,0,0,0.34945333648406,0,0,0,0,0,0,1.12990370390266,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,1.96957955768059,1.97798060114799,2.56133466645903,6.88992370603241,0,0,0,2.41129722697529,4.67634084430595,2.07720169014593,0,0,0.0607495566580247,2.68347750079413,1.10327990218877,5.03564046095982,0,4.84075816198681,0.191915197319445,0,0,0,0,0,0,0,0,0,0,1.02586563574658,2.65013777824443,0.129282956361551,0.13223260174269,0.684347351537318,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,2.29363678276028,0.665574309221114,0.372578417648301,0,0.74988244777264,0,0,0,0,0,0,0,0,0.568209015825267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,1.79369063011563,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,1.02315497042921,0,0,0,0,2.12574920101683,0.991486114072017,0,0,0,0,0,1.2249819094128,0.256916900385838,0,0.159633859057151,0,0,0.207471757392654,0.322951291263702,0,0.588886311006154,0,0.183428598521679,0,0,0,0.397832444232549,0,0,0.781514011233092,0.261906694481422,0,0.295712172434091,0.0675375846183947,0,0,0,0,2.74128883428591,0,0,0.255524855279191,0,0,0,0.227662191351298,1.24183318227694,0,0,0.203909198930495,0.197318320688547,0,0,0,0.157115589916002,0,2.73947616152849,0.863710364874486,2.8665101273223,3.57382720883282,0.158013611732727,0,0.173858272302579,0,0,0.17071847709395,0,1.29068207646083,0,0,0.423387050190929,0,0,0,3.69122924932715,0.196300467230486,0,0,0,0,0.485710993059139,0,0,0,0,0.549702583727146,0,0.463044948647668,1.96703604453562,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0.169927114687817,0,0.0644578879735772,0.0999411559249289,0.178553938605658,0,0.160482733378337,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| ||
|short_description=p@chr11:70962884..70962930,- | |short_description=p@chr11:70962884..70962930,- | ||
}} | }} |
Latest revision as of 02:06, 24 July 2015
Short description: | p@chr11:70962884..70962930, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:70962884..70962930, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.85e-15 | 5 |
hepatocyte | 2.70e-11 | 12 |
kidney tubule cell | 3.38e-07 | 10 |
nephron tubule epithelial cell | 3.38e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 5.95e-13 | 31 |
exocrine system | 5.95e-13 | 31 |
abdomen element | 1.43e-11 | 54 |
abdominal segment element | 1.43e-11 | 54 |
liver | 6.02e-11 | 19 |
digestive gland | 6.02e-11 | 19 |
liver bud | 6.02e-11 | 19 |
abdominal segment of trunk | 5.27e-10 | 60 |
abdomen | 5.27e-10 | 60 |
hepatic diverticulum | 3.22e-09 | 22 |
liver primordium | 3.22e-09 | 22 |
gland | 7.98e-09 | 59 |
digestive tract diverticulum | 9.60e-09 | 23 |
epithelial sac | 6.55e-08 | 25 |
epithelium of foregut-midgut junction | 6.55e-08 | 25 |
anatomical boundary | 6.55e-08 | 25 |
hepatobiliary system | 6.55e-08 | 25 |
foregut-midgut junction | 6.55e-08 | 25 |
septum transversum | 6.55e-08 | 25 |
endocrine gland | 6.72e-08 | 35 |
sac | 1.53e-07 | 26 |
gut epithelium | 1.93e-07 | 54 |
nephron tubule epithelium | 3.38e-07 | 10 |
major salivary gland | 6.97e-07 | 2 |