FFCP PHASE1:Hg19::chr17:1666108..1666122,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:1666108..1666122,+ | |||
|description=CAGE_peak_at_chr17:1666108..1666122,+ | |description=CAGE_peak_at_chr17:1666108..1666122,+ | ||
|id=chr17:1666108..1666122,+ | |id=chr17:1666108..1666122,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.04e-10!180;CL:0000147!5.91e-08!14;CL:0000148!5.69e-07!10;CL:0000541!5.69e-07!10 | |ontology_enrichment_celltype=CL:0000055!5.04e-10!180;CL:0000147!5.91e-08!14;CL:0000148!5.69e-07!10;CL:0000541!5.69e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.84e-09;12!CL:0000147;1.18e-08;14!CL:0000148;2.62e-07;10!CL:0002567;2.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.79e-09,12;CL:0000147,5.99e-09,14;CL:0000148,1.54e-07,10;CL:0000541,1.54e-07,10;CL:0002567,1.78e-07,3;CL:0000223,4.09e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.64e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.73e-09!347;UBERON:0000914!2.46e-07!83;UBERON:0002329!2.46e-07!83;UBERON:0003077!2.46e-07!83;UBERON:0003059!2.46e-07!83;UBERON:0007282!2.46e-07!83;UBERON:0009618!2.46e-07!83;UBERON:0007285!2.46e-07!83;UBERON:0000475!3.76e-07!365;UBERON:0005256!5.24e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.60e-10;19!UBERON:0006925;1.60e-10;19!UBERON:0002423;3.95e-09;25!UBERON:0001134;1.99e-07;16!UBERON:0002036;1.99e-07;16!UBERON:0000966;4.56e-07;5!UBERON:0005388;4.56e-07;5!UBERON:0001802;4.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,8.41e-11,22;UBERON:0003894,8.41e-11,22;UBERON:0002107,1.37e-10,19;UBERON:0006925,1.37e-10,19;UBERON:0008836,1.37e-10,19;UBERON:0009854,3.26e-10,23;UBERON:0007499,3.51e-09,25;UBERON:0009497,3.51e-09,25;UBERON:0000015,3.51e-09,25;UBERON:0002423,3.51e-09,25;UBERON:0006235,3.51e-09,25;UBERON:0004161,3.51e-09,25;UBERON:0009856,1.00e-08,26;UBERON:0005256,4.71e-08,122;UBERON:0003929,7.32e-07,54 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0.631719873426831,0.783556884599516,0,0,0,0,0.247532705920093,0,0.672325146451775,0,0.730310090387373,0.487932798790507,0.246242116153576,0,0.313454721478088,0,0.136874425072884,0,0,0,0,0,0,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0.546138611262131,0,0,0,0,1.32208974556972,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.523916301990851,0.728590576585084,0.370784442784429,0,0,0,0.953962497221368,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0.286836620748814,0.354668382198357,0,0,0,0.933633106199299,0.134710672069688,0.163461903113459,0.454072282934794,0,3.28050004567315,1.24864030732128,0.570471821544449,1.49448680551801,0.23486899728753,0,0,0.816616685019573,1.10550885580591,1.03325781175765,0,1.23633464639278,0,2.15585442544872,0.168336113954066,0.875829639103749,0,0,0,0.45071417671979,0,0,0.213557388818567,0,0,0.206105058476878,0,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.646584227275248,0,0,0,0.57978255948989,0.272746120590835,0,0.121973706129595,0.397589304964456,0.116193942869518,0.414644220061482,0.504641701751257,1.09493207722749,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,7.60530208930985,4.91413608338813,16.5421173870793,0,2.7057456479485,0,0,0,0.100528972411631,0.0925884451585296,2.93227474779292,1.03993478527958,0,0.579652024875384,0,0,0,0,0,0,0,0,0.148631162288728,0.93733833986777,0.671928512795438,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,2.41291998310242,3.81988425558278,3.51652341630141,1.71072446022705,0.925447434329912,1.8020583470635,3.42991719156694,0,0,0,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,1.08524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0,1.43248770591916,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.207970861530807,0,0.157702415033935,0,1.20378439891088,2.27407504055985,0,0,0,0.173767228936166,0.195801157462741,4.11772108573027,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0.308419387605311,0.710246901252508,0.574890092096664,0.519254429183621,0.232420756919918,0.604297247958111,0.40101294060657,0.460404944679482,1.49258782613989,1.63882051206045,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,3.33385162651306,1.64007322849853,0.976135183992909,3.09123034943167,0,0,0,0,0,7.34697459020127,0.154048617114644,1.22802939780904,2.34322173223702,0.322260734604821,0.870100163485371,0.852266274161009,9.34836374290742,2.47927373041467,3.65161127993702,1.27612712494584,2.8324178639554,0,0,2.0911118104818,0,0.532306030317022,0.869932992075073,0,0,0,0.316379424718726,0.190630193923825,1.535386747868,1.71175595213568,0.318203247925937,0,1.61885211824983,0.274537029736055,0.117812402345686,0.606547444719948,0,0,2.43816869544795,0.487426979262569,0,0.272999822815972,2.2624869112594,2.26016233240486,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0.392996164052485,0,0,1.26664581178598,0.329294892959902,0,1.39973888097993,0.865999014529609,0,0,3.57746442951761,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0.586032717087576,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0.102268682502155,0,0,0.179736702294654,0,0.511572370226872,0.394573622547734,2.3948309234694,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0.269272933229316,0,0,0,0,0,0,0.332423363800313,0,0,0,0.189753732724185,0,0,0,0.848118428603645,0,0.995261931078505,0.265372693510018,0,0,0,0,0.337005664903385,0,0.234264445725339,0.364909578431332,0.586993856796269,4.12726645207958,0,0,0,2.78020950365347,0,0,0,0,0,0,0.284609546029793,3.18951747930219,0,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.0969890164884194,2.02989091390451,1.12990370390266,0,0,0.50648636764703,0,0.0801588202515337,0,1.19885765749278,0.144090417154106,0.229073192331831,19.0470447626781,0,1.36677789121976,0,0,0,0,0.288950589901519,0.600420288709789,0.136905378891993,0,0,0,0.279282401272254,0,0,0.399358000997982,0,0,0,0,26.7940683913144,6.14508821996344,6.92293210401798,6.74035438541849,0.0984274815147488,0,0,0.272406812223151,0.321506296930038,0.275078873194468,1.24632101408756,6.97419063809651,5.41661368190565,0.182248669974074,0,0.157611414598396,0.209818352539992,0.105600336519406,0,0,0,1.32418394073086,0.25426853765475,0.542999601753713,0,0,0,0,0,0,14.6552233678082,1.32506888912221,0,0.13223260174269,0,0,0,0,0,0,6.12596058883627,0,0.638341257770182,1.63205341010842,0,0.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| ||
|short_description=p@chr17:1666108..1666122,+ | |short_description=p@chr17:1666108..1666122,+ | ||
}} | }} |
Latest revision as of 14:13, 25 July 2015
Short description: | p@chr17:1666108..1666122, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:1666108..1666122, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.79e-09 | 12 |
pigment cell | 5.99e-09 | 14 |
melanocyte | 1.54e-07 | 10 |
melanoblast | 1.54e-07 | 10 |
light melanocyte | 1.78e-07 | 3 |
endodermal cell | 4.09e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 8.41e-11 | 22 |
liver primordium | 8.41e-11 | 22 |
liver | 1.37e-10 | 19 |
digestive gland | 1.37e-10 | 19 |
liver bud | 1.37e-10 | 19 |
digestive tract diverticulum | 3.26e-10 | 23 |
epithelial sac | 3.51e-09 | 25 |
epithelium of foregut-midgut junction | 3.51e-09 | 25 |
anatomical boundary | 3.51e-09 | 25 |
hepatobiliary system | 3.51e-09 | 25 |
foregut-midgut junction | 3.51e-09 | 25 |
septum transversum | 3.51e-09 | 25 |
sac | 1.00e-08 | 26 |
trunk mesenchyme | 4.71e-08 | 122 |
gut epithelium | 7.32e-07 | 54 |