FFCP PHASE1:Hg19::chr17:26696309..26696338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:26696309..26696338,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr17:26696309..26696338,+ | |description=CAGE_peak_at_chr17:26696309..26696338,+ | ||
|id=chr17:26696309..26696338,+ | |id=chr17:26696309..26696338,+ | ||
|ontology_enrichment_celltype=CL:0000181!1.73e-14!12;CL:0000417!1.73e-14!12;CL:0000668!1.73e-14!12;CL:0000414!1.73e-14!12;CL:0000412!1.73e-14!12;CL:0000182!1.73e-14!12;CL:0000077!9.18e-14!19;CL:0002563!5.20e-09!4;CL:0002097!4.75e-08!2 | |ontology_enrichment_celltype=CL:0000181!1.73e-14!12;CL:0000417!1.73e-14!12;CL:0000668!1.73e-14!12;CL:0000414!1.73e-14!12;CL:0000412!1.73e-14!12;CL:0000182!1.73e-14!12;CL:0000077!9.18e-14!19;CL:0002563!5.20e-09!4;CL:0002097!4.75e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.06e-18;4!CL:0000182;2.46e-14;12!CL:0002253;3.27e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.72e-19,4;CL:0000182,2.40e-14,12;CL:0002253,2.99e-10,2;CL:0000223,7.23e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.25e-19;1!UBERON:0004161;1.26e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.38e-14!19;UBERON:0006925!1.38e-14!19;UBERON:0008836!1.38e-14!19;UBERON:0003929!1.46e-13!54;UBERON:0009497!4.79e-13!25;UBERON:0000015!4.79e-13!25;UBERON:0002423!4.79e-13!25;UBERON:0006235!4.79e-13!25;UBERON:0004161!4.79e-13!25;UBERON:0005172!8.60e-13!55;UBERON:0005173!8.60e-13!55;UBERON:0005057!2.28e-12!26;UBERON:0008835!2.38e-12!22;UBERON:0003894!2.38e-12!22;UBERON:0009854!9.80e-12!23;UBERON:0002417!3.67e-11!61;UBERON:0000916!3.67e-11!61;UBERON:0007499!1.18e-10!25;UBERON:0002368!1.29e-10!35;UBERON:0009856!3.56e-10!26;UBERON:0005911!4.72e-10!82;UBERON:0004921!7.37e-10!129;UBERON:0004185!7.37e-10!129;UBERON:0001242!5.20e-09!4;UBERON:0001262!5.20e-09!4;UBERON:0004786!5.20e-09!4;UBERON:0004808!5.20e-09!4;UBERON:0001277!5.20e-09!4;UBERON:0002530!6.05e-09!59;UBERON:0002365!2.98e-08!31;UBERON:0002330!2.98e-08!31;UBERON:0001007!4.15e-08!155;UBERON:0001555!4.15e-08!155;UBERON:0007026!4.15e-08!155;UBERON:0000949!9.69e-08!45;UBERON:0005177!2.24e-07!107;UBERON:0003350!2.80e-07!5;UBERON:0000077!5.15e-07!130;UBERON:0004119!5.58e-07!169;UBERON:0000925!5.58e-07!169;UBERON:0006595!5.58e-07!169;UBERON:0009569!9.15e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.21e-24;19!UBERON:0006925;4.21e-24;19!UBERON:0001242;1.06e-18;4!UBERON:0001262;1.06e-18;4!UBERON:0004786;1.06e-18;4!UBERON:0004808;1.06e-18;4!UBERON:0001277;1.06e-18;4!UBERON:0002423;2.30e-18;25!UBERON:0002365;8.30e-15;31!UBERON:0002330;8.30e-15;31!UBERON:0002368;7.82e-13;33!UBERON:0000485;4.06e-11;7!UBERON:0003929;4.06e-11;7!UBERON:0003350;7.59e-10;8!UBERON:0000949;2.24e-09;43!UBERON:0001007;3.64e-09;81!UBERON:0005172;7.70e-07;52!UBERON:0005173;7.70e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.21e-24,19;UBERON:0006925,4.21e-24,19;UBERON:0008836,4.21e-24,19;UBERON:0008835,7.62e-21,22;UBERON:0003894,7.62e-21,22;UBERON:0009854,6.02e-20,23;UBERON:0001242,9.72e-19,4;UBERON:0001262,9.72e-19,4;UBERON:0004786,9.72e-19,4;UBERON:0004808,9.72e-19,4;UBERON:0001277,9.72e-19,4;UBERON:0007499,2.30e-18,25;UBERON:0009497,2.30e-18,25;UBERON:0000015,2.30e-18,25;UBERON:0002423,2.30e-18,25;UBERON:0006235,2.30e-18,25;UBERON:0004161,2.30e-18,25;UBERON:0009856,1.15e-17,26;UBERON:0003929,3.84e-16,54;UBERON:0002365,7.70e-15,31;UBERON:0002330,7.70e-15,31;UBERON:0002368,3.71e-13,35;UBERON:0005911,1.59e-10,82;UBERON:0000949,2.99e-10,45;UBERON:0003350,7.26e-10,8;UBERON:0000485,7.16e-09,9;UBERON:0005172,1.51e-08,54;UBERON:0005173,1.51e-08,54;UBERON:0002530,7.98e-08,59;UBERON:0002417,1.08e-07,60;UBERON:0000916,1.08e-07,60;UBERON:0004921,3.96e-07,118 | |||
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| ||
|short_description=p@chr17:26696309..26696338,+ | |short_description=p@chr17:26696309..26696338,+ | ||
}} | }} |
Latest revision as of 14:57, 25 July 2015
Short description: | p@chr17:26696309..26696338, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:26696309..26696338, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.72e-19 | 4 |
hepatocyte | 2.40e-14 | 12 |
epithelial cell of large intestine | 2.99e-10 | 2 |
endodermal cell | 7.23e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 4.21e-24 | 19 |
digestive gland | 4.21e-24 | 19 |
liver bud | 4.21e-24 | 19 |
hepatic diverticulum | 7.62e-21 | 22 |
liver primordium | 7.62e-21 | 22 |
digestive tract diverticulum | 6.02e-20 | 23 |
intestinal mucosa | 9.72e-19 | 4 |
wall of intestine | 9.72e-19 | 4 |
gastrointestinal system mucosa | 9.72e-19 | 4 |
gastrointestinal system epithelium | 9.72e-19 | 4 |
intestinal epithelium | 9.72e-19 | 4 |
epithelial sac | 2.30e-18 | 25 |
epithelium of foregut-midgut junction | 2.30e-18 | 25 |
anatomical boundary | 2.30e-18 | 25 |
hepatobiliary system | 2.30e-18 | 25 |
foregut-midgut junction | 2.30e-18 | 25 |
septum transversum | 2.30e-18 | 25 |
sac | 1.15e-17 | 26 |
gut epithelium | 3.84e-16 | 54 |
exocrine gland | 7.70e-15 | 31 |
exocrine system | 7.70e-15 | 31 |
endocrine gland | 3.71e-13 | 35 |
endo-epithelium | 1.59e-10 | 82 |
endocrine system | 2.99e-10 | 45 |
epithelium of mucosa | 7.26e-10 | 8 |
simple columnar epithelium | 7.16e-09 | 9 |
abdomen element | 1.51e-08 | 54 |
abdominal segment element | 1.51e-08 | 54 |
gland | 7.98e-08 | 59 |
abdominal segment of trunk | 1.08e-07 | 60 |
abdomen | 1.08e-07 | 60 |
subdivision of digestive tract | 3.96e-07 | 118 |