FFCP PHASE1:Hg19::chr12:12623621..12623624,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:12623621..12623624,+ | |||
|description=CAGE_peak_at_chr12:12623621..12623624,+ | |description=CAGE_peak_at_chr12:12623621..12623624,+ | ||
|id=chr12:12623621..12623624,+ | |id=chr12:12623621..12623624,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000623;2.47e-12;3!CL:0000791;7.65e-08;18!CL:0000789;7.65e-08;18!CL:0002419;7.65e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.15e-12,3;CL:0000825,2.15e-12,3;CL:0000791,7.07e-08,18;CL:0000789,7.07e-08,18;CL:0002420,7.07e-08,18;CL:0002419,7.07e-08,18;CL:0000790,7.07e-08,18;CL:0000738,8.66e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;7.65e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001874;1.20e-09;1!UBERON:0002038;1.20e-09;1!UBERON:0009661;1.20e-09;1!UBERON:0002950;1.20e-09;1!UBERON:0001891;1.20e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,6.31e-10,1;UBERON:0009661,6.31e-10,1;UBERON:0002950,6.31e-10,1;UBERON:0001891,6.31e-10,1;UBERON:0009616,6.31e-10,1;UBERON:0010286,6.31e-10,1;UBERON:0001874,6.88e-10,1 | |||
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| ||
|short_description=p@chr12:12623621..12623624,+ | |short_description=p@chr12:12623621..12623624,+ | ||
}} | }} |
Latest revision as of 06:33, 24 July 2015
Short description: | p@chr12:12623621..12623624, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:12623621..12623624, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.15e-12 | 3 |
pro-NK cell | 2.15e-12 | 3 |
mature alpha-beta T cell | 7.07e-08 | 18 |
alpha-beta T cell | 7.07e-08 | 18 |
immature T cell | 7.07e-08 | 18 |
mature T cell | 7.07e-08 | 18 |
immature alpha-beta T cell | 7.07e-08 | 18 |
leukocyte | 8.66e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 6.31e-10 | 1 |
midbrain nucleus | 6.31e-10 | 1 |
regional part of midbrain | 6.31e-10 | 1 |
midbrain | 6.31e-10 | 1 |
presumptive midbrain | 6.31e-10 | 1 |
midbrain neural tube | 6.31e-10 | 1 |
putamen | 6.88e-10 | 1 |