FFCP PHASE1:Hg19::chr12:1813242..1813247,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:1813242..1813247,+ | |||
|description=CAGE_peak_at_chr12:1813242..1813247,+ | |description=CAGE_peak_at_chr12:1813242..1813247,+ | ||
|id=chr12:1813242..1813247,+ | |id=chr12:1813242..1813247,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.05e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.48e-10!115;UBERON:0001049!3.59e-08!57;UBERON:0005068!3.59e-08!57;UBERON:0006241!3.59e-08!57;UBERON:0007135!3.59e-08!57;UBERON:0002308!1.94e-07!9;UBERON:0000125!1.94e-07!9;UBERON:0002780!3.62e-07!41;UBERON:0001890!3.62e-07!41;UBERON:0006240!3.62e-07!41;UBERON:0003080!8.32e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!4.48e-10!115;UBERON:0001049!3.59e-08!57;UBERON:0005068!3.59e-08!57;UBERON:0006241!3.59e-08!57;UBERON:0007135!3.59e-08!57;UBERON:0002308!1.94e-07!9;UBERON:0000125!1.94e-07!9;UBERON:0002780!3.62e-07!41;UBERON:0001890!3.62e-07!41;UBERON:0006240!3.62e-07!41;UBERON:0003080!8.32e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002038;1.12e-11;1!UBERON:0009661;1.12e-11;1!UBERON:0002950;1.12e-11;1!UBERON:0001891;1.12e-11;1!UBERON:0002336;2.96e-11;1!UBERON:0001000;2.96e-11;1!UBERON:0011215;2.96e-11;1!UBERON:0001018;2.96e-11;1!UBERON:0002473;2.96e-11;1!UBERON:0005340;2.96e-11;1!UBERON:0003544;2.96e-11;1!UBERON:0005970;2.96e-11;1!UBERON:0002316;2.96e-11;1!UBERON:0001020;2.96e-11;1!UBERON:0005352;2.96e-11;1!UBERON:0002437;2.96e-11;1!UBERON:0000125;1.27e-10;9!UBERON:0002308;1.27e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.18e-11,1;UBERON:0009661,1.18e-11,1;UBERON:0002950,1.18e-11,1;UBERON:0001891,1.18e-11,1;UBERON:0009616,1.18e-11,1;UBERON:0010286,1.18e-11,1;UBERON:0001000,3.28e-11,1;UBERON:0005352,3.28e-11,1;UBERON:0002336,4.44e-11,1;UBERON:0011215,4.44e-11,1;UBERON:0001018,4.44e-11,1;UBERON:0002473,4.44e-11,1;UBERON:0005340,4.44e-11,1;UBERON:0003544,4.44e-11,1;UBERON:0005970,4.44e-11,1;UBERON:0002316,4.44e-11,1;UBERON:0001020,4.44e-11,1;UBERON:0002437,4.44e-11,1;UBERON:0000125,9.32e-11,9;UBERON:0002308,9.32e-11,9;UBERON:0009663,9.12e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.328402357799783,0.0787107813136792,0,0,0.154816123316076,0,0,0,0.154934401160603,0.284338464974843,0,2.76997704265939,0.601633342410425,0.217010870715852,0.447830948479849,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.47296445977717,0,0.645484683583826,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0.112328631146495,0.300353785683013,0.16072558669708,0,0.39783335439818,0,0,0.546138611262131,0,0,0,0,0,0,0,1.17447437874188,0,0,0.560508562981536,0,0.196709770113833,0.393010762749165,0.205601498999509,0,0,0,0,0,0.589211814949674,0.664601683750863,0,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.263504357079378,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0.267899184852239,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0.323745888736263,0.140450806702248,0.408308342509787,0.245668634623536,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0.431255149719035,1.02674429023799,0,0,0,0,1.27587750330633,0.749007023947182,5.9832291840805,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.862856803274467,0.213455115606889,0,0,0,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0,0,0,0.483437798366489,0.200506470303285,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0.426133137080504,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0.324621940274555,0,0,0.156679895773023,0,0,0.1605880751037,0.605399121573143,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.37428108081644,0.439524537815682,0,0.111443384277478,0,0,0,0.307160702099232,0,0.703347082052564,0,0,0.211125408127993,0,0,0,0.306806047506464,0.123084805461069,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0.291604613383254,0,0.885741385813839,0.241192877250816,0,0,0,0,0.10893846351899,0.278847488557207,0.0769502585037971,0,0.23056390438806,0.359030577639089,0.651884231532048,0,0,0.533034776018635,0,0,0.166211681900156,0.451191321234361,0,0.167821586975843,0,0,0,0.163232808159148,0.141353071433941,0,2.98578579323551,0.176915129006678,0,0.296521128680622,0.247127877893006,0,1.07841812769083,0.802577647298789,0.468528891450678,0.364909578431332,0.586993856796269,0,1.18375320854817,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0.284609546029793,0.277349346026277,0.173559738335131,0,0.435296032902013,0,0.171986032471617,0.387025325156341,0.0730893170861856,0.164230914106418,0,0.0882561266915003,0,0,0,0,0,0.160317640503067,0.213452994739353,0,0.288180834308212,0.229073192331831,0,0,0.372757606696298,0.235694034616795,0,0,0.101998217636322,0.288950589901519,0.600420288709789,1.77976992559591,0,0,0,0.279282401272254,0.458320848023367,0.717873024576814,0.399358000997982,0,0,0.134366944973453,0.360299883542404,0,0.0787831823072236,0.247247575143499,0.404421263125109,0.0984274815147488,0,0,0.544813624446302,0.160753148465019,0.137539436597234,0.415440338029185,0,1.5476039091159,0.242998226632099,0,0.0788057072991982,0,0.316801009558219,0,0,0.714695326373367,0,0,0,0,0,0,0.246277562248017,0.170388021785422,0,0.146552233678082,0,0.258565912723101,1.45455861916959,0.171086837884329,0,0,0,0.414239055347196,0,0,0.243585196761792,0,1.63205341010842,1.0027595760908,1.53172788381731,0,0,0,0,0.751145584238999,0.573409195690071,0.443716206147409,0.372578417648301,0,0,0,0,0.235265819698172,0.468334905806882,0,0.298509605773748,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0,0,0.179088841081487,0,0,0,0.19291403827091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| ||
|short_description=p@chr12:1813242..1813247,+ | |short_description=p@chr12:1813242..1813247,+ | ||
}} | }} |
Latest revision as of 07:19, 24 July 2015
Short description: | p@chr12:1813242..1813247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:1813242..1813247, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.18e-11 | 1 |
midbrain nucleus | 1.18e-11 | 1 |
regional part of midbrain | 1.18e-11 | 1 |
midbrain | 1.18e-11 | 1 |
presumptive midbrain | 1.18e-11 | 1 |
midbrain neural tube | 1.18e-11 | 1 |
vas deferens | 3.28e-11 | 1 |
spermatic cord | 3.28e-11 | 1 |
corpus callosum | 4.44e-11 | 1 |
central nervous system cell part cluster | 4.44e-11 | 1 |
axon tract | 4.44e-11 | 1 |
intercerebral commissure | 4.44e-11 | 1 |
dorsal telencephalic commissure | 4.44e-11 | 1 |
brain white matter | 4.44e-11 | 1 |
brain commissure | 4.44e-11 | 1 |
white matter | 4.44e-11 | 1 |
nervous system commissure | 4.44e-11 | 1 |
cerebral hemisphere white matter | 4.44e-11 | 1 |
neural nucleus | 9.32e-11 | 9 |
nucleus of brain | 9.32e-11 | 9 |
telencephalic nucleus | 9.12e-07 | 7 |