FFCP PHASE1:Hg19::chr12:50337021..50337036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:50337021..50337036,+ | |||
|coexpression_cluster_id=C144 | |||
|description=CAGE_peak_at_chr12:50337021..50337036,+ | |description=CAGE_peak_at_chr12:50337021..50337036,+ | ||
|id=chr12:50337021..50337036,+ | |id=chr12:50337021..50337036,+ | ||
|ontology_enrichment_celltype=CL:0000624!6.40e-14!6;CL:0002150!3.21e-10!3;CL:0000861!3.21e-10!3;CL:0000791!4.76e-08!18;CL:0000789!4.76e-08!18;CL:0002420!4.76e-08!18;CL:0002419!4.76e-08!18;CL:0000790!4.76e-08!18;CL:0000815!6.28e-08!2;CL:0000792!6.28e-08!2;CL:0002677!6.28e-08!2;CL:0000084!4.03e-07!25;CL:0000827!4.03e-07!25 | |ontology_enrichment_celltype=CL:0000624!6.40e-14!6;CL:0002150!3.21e-10!3;CL:0000861!3.21e-10!3;CL:0000791!4.76e-08!18;CL:0000789!4.76e-08!18;CL:0002420!4.76e-08!18;CL:0002419!4.76e-08!18;CL:0000790!4.76e-08!18;CL:0000815!6.28e-08!2;CL:0000792!6.28e-08!2;CL:0002677!6.28e-08!2;CL:0000084!4.03e-07!25;CL:0000827!4.03e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000815;5.74e-08;2!CL:0000792;5.74e-08;2!CL:0002677;5.74e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.74e-08,2;CL:0000792,5.74e-08,2;CL:0002677,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006298;6.22e-15;1!UBERON:0008801;9.36e-15;1 | |||
|ontology_enrichment_disease=DOID:3493!1.32e-07!2 | |ontology_enrichment_disease=DOID:3493!1.32e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3493;5.74e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.15e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001829!1.93e-08!2;UBERON:0000341!1.08e-07!2;UBERON:0000166!5.30e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.10e-28;2!UBERON:0001044;7.79e-21;6!UBERON:0003293;7.79e-21;6!UBERON:0003294;7.79e-21;6!UBERON:0010047;7.79e-21;6!UBERON:0003408;7.79e-21;6!UBERON:0000167;7.79e-21;6!UBERON:0001041;1.22e-15;14!UBERON:0001736;6.22e-15;1!UBERON:0001831;9.36e-15;1!UBERON:0001567;9.36e-15;1!UBERON:0004089;5.02e-08;2!UBERON:0003127;8.89e-08;2!UBERON:0000161;5.75e-07;19!UBERON:0000166;5.75e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,7.10e-28,2;UBERON:0001044,7.79e-21,6;UBERON:0003293,7.79e-21,6;UBERON:0003294,7.79e-21,6;UBERON:0010047,7.79e-21,6;UBERON:0000167,7.79e-21,6;UBERON:0001736,6.22e-15,1;UBERON:0006298,6.22e-15,1;UBERON:0001831,9.36e-15,1;UBERON:0001567,9.36e-15,1;UBERON:0008801,9.36e-15,1;UBERON:0003408,9.27e-13,10;UBERON:0004089,5.02e-08,2;UBERON:0003127,9.19e-08,2 | |||
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| ||
|short_description=p@chr12:50337021..50337036,+ | |short_description=p@chr12:50337021..50337036,+ | ||
}} | }} |
Latest revision as of 09:10, 24 July 2015
Short description: | p@chr12:50337021..50337036, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:50337021..50337036, + |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.74e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.74e-08 | 2 |
naive regulatory T cell | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 7.10e-28 | 2 |
saliva-secreting gland | 7.79e-21 | 6 |
gland of oral region | 7.79e-21 | 6 |
gland of foregut | 7.79e-21 | 6 |
oral gland | 7.79e-21 | 6 |
oral cavity | 7.79e-21 | 6 |
submandibular gland | 6.22e-15 | 1 |
submandibular gland primordium | 6.22e-15 | 1 |
parotid gland | 9.36e-15 | 1 |
cheek | 9.36e-15 | 1 |
parotid gland primordium | 9.36e-15 | 1 |
gland of gut | 9.27e-13 | 10 |
midface | 5.02e-08 | 2 |
open tracheal system trachea | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.15e-08 | 2 |