FFCP PHASE1:Hg19::chr12:56366003..56366033,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:56366003..56366033,+ | |||
|description=CAGE_peak_at_chr12:56366003..56366033,+ | |description=CAGE_peak_at_chr12:56366003..56366033,+ | ||
|id=chr12:56366003..56366033,+ | |id=chr12:56366003..56366033,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000148;3.88e-40;10!CL:0002567;1.39e-34;3!CL:0000147;1.30e-28;14!CL:0000710;7.88e-27;20!CL:0000453;2.20e-20;5!CL:0000075;9.87e-20;27!CL:0002077;1.45e-14;34!CL:0002566;8.84e-13;1!CL:0000990;1.33e-11;8!CL:0000451;1.36e-09;10!CL:0000047;9.27e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.68e-40,10;CL:0000541,2.68e-40,10;CL:0002567,9.90e-35,3;CL:0000147,1.00e-28,14;CL:0000710,7.30e-27,20;CL:0000453,2.60e-20,5;CL:0000075,9.33e-20,27;CL:0002077,1.44e-15,34;CL:0002566,1.11e-12,1;CL:0000990,1.46e-11,8;CL:0000133,7.40e-11,59;CL:0000451,1.47e-09,10;CL:0000333,4.07e-09,41;CL:0000221,8.66e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.61e-09!86;UBERON:0001049!1.35e-08!57;UBERON:0005068!1.35e-08!57;UBERON:0006241!1.35e-08!57;UBERON:0007135!1.35e-08!57;UBERON:0001017!1.49e-08!82;UBERON:0000073!2.46e-08!94;UBERON:0001016!2.46e-08!94;UBERON:0002346!1.15e-07!90;UBERON:0000924!2.59e-07!173;UBERON:0006601!2.59e-07!173;UBERON:0003075!4.58e-07!86;UBERON:0007284!4.58e-07!86;UBERON:0002616!5.63e-07!59;UBERON:0000955!7.96e-07!69;UBERON:0006238!7.96e-07!69;UBERON:0004121!8.50e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p@chr12:56366003..56366033,+ | |short_description=p@chr12:56366003..56366033,+ | ||
}} | }} |
Latest revision as of 10:16, 24 July 2015
Short description: | p@chr12:56366003..56366033, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:56366003..56366033, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.68e-40 | 10 |
melanoblast | 2.68e-40 | 10 |
light melanocyte | 9.90e-35 | 3 |
pigment cell | 1.00e-28 | 14 |
neurecto-epithelial cell | 7.30e-27 | 20 |
Langerhans cell | 2.60e-20 | 5 |
columnar/cuboidal epithelial cell | 9.33e-20 | 27 |
ecto-epithelial cell | 1.44e-15 | 34 |
dark melanocyte | 1.11e-12 | 1 |
conventional dendritic cell | 1.46e-11 | 8 |
neurectodermal cell | 7.40e-11 | 59 |
dendritic cell | 1.47e-09 | 10 |
migratory neural crest cell | 4.07e-09 | 41 |
ectodermal cell | 8.66e-09 | 72 |