FFCP PHASE1:Hg19::chr12:58141331..58141342,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:58141331..58141342,+ | |||
|description=CAGE_peak_at_chr12:58141331..58141342,+ | |description=CAGE_peak_at_chr12:58141331..58141342,+ | ||
|id=chr12:58141331..58141342,+ | |id=chr12:58141331..58141342,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;5.15e-21;2!CL:0000540;6.55e-08;6!CL:0000404;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,5.70e-21,2;CL:0000008,5.70e-21,2;CL:0000540,5.92e-08,6;CL:0000031,5.92e-08,6;CL:0000404,5.92e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000008;5.15e-21;2!CL:0000031;6.55e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.71e-14;3!DOID:127;1.71e-14;3!DOID:0060072;3.26e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.60e-14,3;DOID:127,1.60e-14,3;DOID:0060072,3.10e-11,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;5.15e-21;2!UBERON:0001777;5.15e-21;2!UBERON:0003891;3.26e-11;4!UBERON:0000964;3.26e-11;4!UBERON:0010409;3.26e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003566,5.70e-21,2;UBERON:0001777,5.70e-21,2;UBERON:0003891,3.42e-11,4;UBERON:0000964,3.42e-11,4;UBERON:0010409,3.42e-11,4;UBERON:0004348,3.42e-11,4;UBERON:0005427,3.42e-11,4 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0.34444334449382,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0,0,0.0852266274161009,0,0,0.384380134730212,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0.86101074534246,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,1.08599920350743,0,0.326587360109409,0,0,3.9189245010647,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0.327130788511688,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0,0.208994966536811,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0.30648779579902,0,0.113432183160021,0,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0.790204397959275,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,1.27587750330633,0,0,0,0,0.500170521059677,0,0,0.356857977594324,0.157702415033935,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0.120859449591622,0,0,0.34444334449382,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0,0,0,0.0852266274161009,0,0,0.384380134730212,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.143411352204052,0,0,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0,0,0,0.86101074534246,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0.102268682502155,0,0.933118762985422,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.241192877250816,0,0.221158519862449,0,0.219385397153973,0,0,0,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0.39961921916426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,1.08599920350743,0,0.326587360109409,0,0,3.9189245010647,0,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0.336749488765919,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0.327130788511688,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0.12729431655633,0,0,0,0,0.0717222053926763,0.332660356546013,0,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr12:58141331..58141342,+ | |short_description=p@chr12:58141331..58141342,+ | ||
}} | }} |
Latest revision as of 10:56, 24 July 2015
Short description: | p@chr12:58141331..58141342, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:58141331..58141342, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 5.70e-21 | 2 |
migratory cranial neural crest cell | 5.70e-21 | 2 |
neuron | 5.92e-08 | 6 |
neuroblast | 5.92e-08 | 6 |
electrically signaling cell | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
head connective tissue | 5.70e-21 | 2 |
substantia propria of cornea | 5.70e-21 | 2 |
stroma | 3.42e-11 | 4 |
cornea | 3.42e-11 | 4 |
eye surface | 3.42e-11 | 4 |
optic eminence | 3.42e-11 | 4 |
corneal primordium | 3.42e-11 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.60e-14 | 3 |
leiomyoma | 1.60e-14 | 3 |
benign neoplasm | 3.10e-11 | 4 |