FFCP PHASE1:Hg19::chr17:75446774..75446783,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10801 | |EntrezGene=10801 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7323 | |HGNC=7323 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHD8 | |UniProt=Q9UHD8 | ||
|association_with_transcript=161bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | |association_with_transcript=161bp_to_ENST00000431235,NM_001113496,uc002jty.3_5end | ||
|cluster_id=chr17:75446774..75446783,+ | |||
|coexpression_cluster_id=C368 | |||
|description=CAGE_peak_49_at_SEPT9_5end | |description=CAGE_peak_49_at_SEPT9_5end | ||
|id=chr17:75446774..75446783,+ | |id=chr17:75446774..75446783,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000669;4.92e-26;4!CL:0002575;6.36e-24;2!CL:0002549;2.48e-23;2!CL:0000222;2.32e-12;1!CL:0002591;2.32e-12;1!CL:0000182;7.76e-09;12!CL:0000047;5.26e-07;2!CL:0000650;8.28e-07;2!CL:1000500;8.28e-07;2!CL:1000618;8.28e-07;2!CL:1001318;8.28e-07;2!CL:0002173;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,8.56e-26,4;CL:0002575,6.38e-24,2;CL:0002549,1.42e-23,2;CL:0002591,3.45e-12,1;CL:0000182,6.51e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.36e-09;11!UBERON:0009497;3.39e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;2.48e-23;2!UBERON:0005358;2.48e-23;2!UBERON:0001886;2.48e-23;2!UBERON:0004086;2.48e-23;2!UBERON:0005282;2.48e-23;2!UBERON:0005281;2.48e-23;2!UBERON:0005284;6.50e-10;5!UBERON:0002107;1.63e-09;19!UBERON:0006925;1.63e-09;19!UBERON:0002423;2.84e-07;25!UBERON:0000078;8.28e-07;2!UBERON:0003567;8.28e-07;2!UBERON:0003838;8.28e-07;2!UBERON:0003586;8.28e-07;2!UBERON:0005169;8.28e-07;2!UBERON:0002321;8.28e-07;2!UBERON:0002012;8.28e-07;2!UBERON:0005215;8.28e-07;2!UBERON:0002303;8.28e-07;2!UBERON:0008886;8.28e-07;2!UBERON:0002319;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.42e-23,2;UBERON:0005358,1.42e-23,2;UBERON:0001886,1.42e-23,2;UBERON:0004086,1.42e-23,2;UBERON:0005282,1.42e-23,2;UBERON:0005281,1.42e-23,2;UBERON:0005284,5.20e-10,5;UBERON:0002107,1.36e-09,19;UBERON:0006925,1.36e-09,19;UBERON:0008836,1.36e-09,19;UBERON:0008835,2.62e-08,22;UBERON:0003894,2.62e-08,22;UBERON:0009854,5.91e-08,23;UBERON:0007499,2.48e-07,25;UBERON:0009497,2.48e-07,25;UBERON:0000015,2.48e-07,25;UBERON:0002423,2.48e-07,25;UBERON:0006235,2.48e-07,25;UBERON:0004161,2.48e-07,25;UBERON:0009856,4.69e-07,26 | |||
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| ||
|short_description=p49@SEPT9 | |short_description=p49@SEPT9 | ||
}} | }} |
Latest revision as of 18:44, 17 September 2015
Short description: | p49@SEPT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_SEPT9_5end |
Coexpression cluster: | C368_Pericytes_Fibroblast_Nucleus_Anulus_Meningeal_Mesenchymal_Smooth |
Association with transcript: | 161bp_to_ENST00000431235, NM_001113496, uc002jty.3_5end |
EntrezGene: | SEPT9 |
HGNC: | 7323 |
UniProt: | Q9UHD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 8.56e-26 | 4 |
central nervous system pericyte | 6.38e-24 | 2 |
fibroblast of choroid plexus | 1.42e-23 | 2 |
smooth muscle cell of the pulmonary artery | 3.45e-12 | 1 |
hepatocyte | 6.51e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.42e-23 | 2 |
ventricle of nervous system | 1.42e-23 | 2 |
choroid plexus | 1.42e-23 | 2 |
brain ventricle | 1.42e-23 | 2 |
ventricular system of brain | 1.42e-23 | 2 |
ventricular system of central nervous system | 1.42e-23 | 2 |
brain vasculature | 5.20e-10 | 5 |
liver | 1.36e-09 | 19 |
digestive gland | 1.36e-09 | 19 |
liver bud | 1.36e-09 | 19 |
hepatic diverticulum | 2.62e-08 | 22 |
liver primordium | 2.62e-08 | 22 |
digestive tract diverticulum | 5.91e-08 | 23 |
epithelial sac | 2.48e-07 | 25 |
epithelium of foregut-midgut junction | 2.48e-07 | 25 |
anatomical boundary | 2.48e-07 | 25 |
hepatobiliary system | 2.48e-07 | 25 |
foregut-midgut junction | 2.48e-07 | 25 |
septum transversum | 2.48e-07 | 25 |
sac | 4.69e-07 | 26 |