FFCP PHASE1:Hg19::chr12:71551618..71551630,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7103 | |EntrezGene=7103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11855 | |HGNC=11855 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc009zrt.1_5end | |association_with_transcript=0bp_to_uc009zrt.1_5end | ||
|cluster_id=chr12:71551618..71551630,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_3_at_TSPAN8_5end | |description=CAGE_peak_3_at_TSPAN8_5end | ||
|id=chr12:71551618..71551630,- | |id=chr12:71551618..71551630,- | ||
|ontology_enrichment_celltype=CL:1000306!1.12e-09!4;CL:0002547!1.12e-09!4;CL:0002595!2.61e-08!5;CL:0002150!1.14e-07!3;CL:0000861!1.14e-07!3 | |ontology_enrichment_celltype=CL:1000306!1.12e-09!4;CL:0002547!1.12e-09!4;CL:0002595!2.61e-08!5;CL:0002150!1.14e-07!3;CL:0000861!1.14e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:1000306;2.75e-16;4!CL:0002547;2.75e-16;4!CL:0002595;4.76e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,3.51e-16,4;CL:0002547,3.51e-16,4;CL:0002595,4.84e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.83e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.95e-09,2 | |||
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| ||
|short_description=p3@TSPAN8 | |short_description=p3@TSPAN8 | ||
}} | }} |
Latest revision as of 16:36, 24 September 2015
Short description: | p3@TSPAN8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TSPAN8_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_uc009zrt.1_5end |
EntrezGene: | TSPAN8 |
HGNC: | 11855 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 3.51e-16 | 4 |
fibroblast of the aortic adventitia | 3.51e-16 | 4 |
smooth muscle cell of the subclavian artery | 4.84e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.85e-26 | 25 |
intestine | 3.46e-23 | 17 |
artery wall | 3.51e-16 | 4 |
tunica adventitia of artery | 3.51e-16 | 4 |
adventitia | 3.51e-16 | 4 |
tunica adventitia of blood vessel | 3.51e-16 | 4 |
aorta tunica adventitia | 3.51e-16 | 4 |
aorta wall | 3.51e-16 | 4 |
large intestine | 3.63e-14 | 11 |
thoracic segment blood vessel | 4.84e-14 | 5 |
subclavian artery | 4.84e-14 | 5 |
systemic artery | 5.24e-13 | 33 |
systemic arterial system | 5.24e-13 | 33 |
trunk blood vessel | 4.73e-10 | 7 |
artery | 9.35e-10 | 42 |
arterial blood vessel | 9.35e-10 | 42 |
arterial system | 9.35e-10 | 42 |
blood vessel layer | 2.62e-09 | 7 |
small intestine | 8.33e-09 | 4 |
lower digestive tract | 2.26e-08 | 5 |
colon | 2.40e-08 | 9 |
subdivision of digestive tract | 1.02e-07 | 118 |
hindgut | 1.66e-07 | 19 |
digestive system | 2.98e-07 | 145 |
digestive tract | 2.98e-07 | 145 |
primitive gut | 2.98e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.95e-09 | 2 |