FFCP PHASE1:Hg19::chr12:78430028..78430042,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:78430028..78430042,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr12:78430028..78430042,+ | |description=CAGE_peak_at_chr12:78430028..78430042,+ | ||
|id=chr12:78430028..78430042,+ | |id=chr12:78430028..78430042,+ | ||
|ontology_enrichment_celltype=CL:0002617!1.67e-11!2;CL:0002579!8.48e-08!3 | |ontology_enrichment_celltype=CL:0002617!1.67e-11!2;CL:0002579!8.48e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.79e-88;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.31e-38!57;UBERON:0005068!1.31e-38!57;UBERON:0006241!1.31e-38!57;UBERON:0007135!1.31e-38!57;UBERON:0002616!3.72e-37!59;UBERON:0000955!1.11e-33!69;UBERON:0006238!1.11e-33!69;UBERON:0001017!2.14e-30!82;UBERON:0005743!9.03e-29!86;UBERON:0004733!1.01e-26!12;UBERON:0002028!1.01e-26!12;UBERON:0007277!1.01e-26!12;UBERON:0003075!1.40e-26!86;UBERON:0007284!1.40e-26!86;UBERON:0002020!7.65e-26!34;UBERON:0003528!7.65e-26!34;UBERON:0000073!1.32e-25!94;UBERON:0001016!1.32e-25!94;UBERON:0002346!3.47e-25!90;UBERON:0004732!1.42e-24!13;UBERON:0001869!7.01e-24!32;UBERON:0001893!2.32e-22!34;UBERON:0002780!2.41e-21!41;UBERON:0001890!2.41e-21!41;UBERON:0006240!2.41e-21!41;UBERON:0003076!3.89e-21!15;UBERON:0003057!3.89e-21!15;UBERON:0002619!6.58e-21!22;UBERON:0003080!8.90e-21!42;UBERON:0007023!1.36e-20!115;UBERON:0002680!1.46e-20!9;UBERON:0001895!1.46e-20!9;UBERON:0010092!1.46e-20!9;UBERON:0002791!1.34e-19!33;UBERON:0000033!1.07e-18!123;UBERON:0001950!1.46e-18!20;UBERON:0000956!2.79e-18!25;UBERON:0000203!2.79e-18!25;UBERON:0000153!1.35e-17!129;UBERON:0007811!1.35e-17!129;UBERON:0002298!9.22e-16!8;UBERON:0000988!9.35e-16!3;UBERON:0003056!1.71e-13!61;UBERON:0004121!3.94e-12!169;UBERON:0000924!9.76e-12!173;UBERON:0006601!9.76e-12!173;UBERON:0002148!9.65e-11!2;UBERON:0009662!9.65e-11!2;UBERON:0000349!2.67e-10!5;UBERON:0001872!7.17e-10!5;UBERON:0002308!4.54e-09!9;UBERON:0000125!4.54e-09!9;UBERON:0000025!5.11e-09!194;UBERON:0002037!8.40e-09!6;UBERON:0006215!8.40e-09!6;UBERON:0000064!2.64e-08!219;UBERON:0000200!3.03e-08!6;UBERON:0003688!3.52e-08!6;UBERON:0002358!3.52e-08!6;UBERON:0003684!3.52e-08!6;UBERON:0001178!3.52e-08!6;UBERON:0001896!7.91e-08!3;UBERON:0005290!7.91e-08!3;UBERON:0010096!7.91e-08!3;UBERON:0006331!1.91e-07!3;UBERON:0000475!3.78e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.09e-44;6!UBERON:0002680;2.87e-30;9!UBERON:0001895;2.87e-30;9!UBERON:0004733;4.86e-23;12!UBERON:0002028;4.86e-23;12!UBERON:0004732;2.28e-21;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-44,6;UBERON:0006215,1.22e-44,6;UBERON:0002680,3.09e-30,9;UBERON:0001895,3.09e-30,9;UBERON:0010092,3.09e-30,9;UBERON:0004733,5.14e-23,12;UBERON:0002028,5.14e-23,12;UBERON:0007277,5.14e-23,12;UBERON:0004732,2.40e-21,13;UBERON:0003076,1.13e-18,15;UBERON:0003057,1.13e-18,15 | |||
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|short_description=p@chr12:78430028..78430042,+ | |short_description=p@chr12:78430028..78430042,+ | ||
}} | }} |
Latest revision as of 12:35, 24 July 2015
Short description: | p@chr12:78430028..78430042, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:78430028..78430042, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-44 | 6 |
rhombic lip | 1.22e-44 | 6 |
regional part of metencephalon | 3.09e-30 | 9 |
metencephalon | 3.09e-30 | 9 |
future metencephalon | 3.09e-30 | 9 |
segmental subdivision of hindbrain | 5.14e-23 | 12 |
hindbrain | 5.14e-23 | 12 |
presumptive hindbrain | 5.14e-23 | 12 |
segmental subdivision of nervous system | 2.40e-21 | 13 |
posterior neural tube | 1.13e-18 | 15 |
chordal neural plate | 1.13e-18 | 15 |