FFCP PHASE1:Hg19::chr18:21743225..21743229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21743225..21743229,- | |||
|description=CAGE_peak_at_chr18:21743225..21743229,- | |description=CAGE_peak_at_chr18:21743225..21743229,- | ||
|id=chr18:21743225..21743229,- | |id=chr18:21743225..21743229,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002615;1.60e-14;3!CL:0002540;6.33e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,2.09e-14,3;CL:0002540,5.92e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.22e-12!115;UBERON:0002346!1.58e-10!90;UBERON:0005743!6.53e-10!86;UBERON:0000924!7.70e-10!173;UBERON:0006601!7.70e-10!173;UBERON:0002780!1.19e-09!41;UBERON:0001890!1.19e-09!41;UBERON:0006240!1.19e-09!41;UBERON:0000073!2.00e-09!94;UBERON:0001016!2.00e-09!94;UBERON:0003080!2.72e-09!42;UBERON:0000468!3.04e-09!659;UBERON:0003056!3.35e-09!61;UBERON:0003075!4.34e-09!86;UBERON:0007284!4.34e-09!86;UBERON:0000153!5.01e-09!129;UBERON:0007811!5.01e-09!129;UBERON:0000033!9.03e-09!123;UBERON:0004121!1.11e-08!169;UBERON:0001893!1.24e-08!34;UBERON:0001017!1.81e-08!82;UBERON:0000923!1.82e-08!604;UBERON:0005291!1.82e-08!604;UBERON:0006598!1.82e-08!604;UBERON:0002532!1.82e-08!604;UBERON:0000922!2.05e-08!612;UBERON:0002050!2.13e-08!605;UBERON:0005423!2.13e-08!605;UBERON:0002791!4.50e-08!33;UBERON:0002619!4.83e-08!22;UBERON:0000064!5.18e-08!219;UBERON:0002020!8.44e-08!34;UBERON:0003528!8.44e-08!34;UBERON:0001049!9.22e-08!57;UBERON:0005068!9.22e-08!57;UBERON:0006241!9.22e-08!57;UBERON:0007135!9.22e-08!57;UBERON:0000467!1.16e-07!625;UBERON:0000475!1.18e-07!365;UBERON:0000480!1.35e-07!626;UBERON:0001950!1.39e-07!20;UBERON:0002616!2.29e-07!59;UBERON:0000062!2.54e-07!511;UBERON:0001869!4.83e-07!32;UBERON:0000956!9.92e-07!25;UBERON:0000203!9.92e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;4.66e-21;2!UBERON:0001723;1.60e-14;3!UBERON:0001033;1.60e-14;3!UBERON:0002021;2.97e-09;5!UBERON:0001950;1.42e-08;20!UBERON:0000200;6.33e-08;6!UBERON:0003688;6.33e-08;6!UBERON:0002358;6.33e-08;6!UBERON:0003684;6.33e-08;6!UBERON:0001178;6.33e-08;6!UBERON:0002619;6.52e-08;22!UBERON:0000956;4.15e-07;25!UBERON:0000203;4.15e-07;25!UBERON:0001871;5.70e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,3.11e-21,2;UBERON:0001723,1.83e-14,3;UBERON:0001033,1.83e-14,3;UBERON:0010056,1.83e-14,3;UBERON:0002021,2.97e-09,5;UBERON:0001950,1.32e-08,20;UBERON:0000200,5.54e-08,6;UBERON:0002619,6.08e-08,22;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6;UBERON:0000956,3.90e-07,25;UBERON:0000203,3.90e-07,25;UBERON:0001871,5.08e-07,6 | |||
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| ||
|short_description=p@chr18:21743225..21743229,- | |short_description=p@chr18:21743225..21743229,- | ||
}} | }} |
Latest revision as of 00:02, 26 July 2015
Short description: | p@chr18:21743225..21743229, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21743225..21743229, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 2.09e-14 | 3 |
mesenchymal stem cell of the bone marrow | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 3.11e-21 | 2 |
tongue | 1.83e-14 | 3 |
gustatory system | 1.83e-14 | 3 |
future tongue | 1.83e-14 | 3 |
occipital lobe | 2.97e-09 | 5 |
neocortex | 1.32e-08 | 20 |
gyrus | 5.54e-08 | 6 |
regional part of cerebral cortex | 6.08e-08 | 22 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
cerebral cortex | 3.90e-07 | 25 |
pallium | 3.90e-07 | 25 |
temporal lobe | 5.08e-07 | 6 |