FFCP PHASE1:Hg19::chr18:23668307..23668326,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:23668307..23668326,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr18:23668307..23668326,- | |description=CAGE_peak_at_chr18:23668307..23668326,- | ||
|id=chr18:23668307..23668326,- | |id=chr18:23668307..23668326,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;1.81e-40;1!CL:0002625;1.81e-40;1!CL:0000216;1.81e-40;1!CL:0000154;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.48e-40,1;CL:0002625,1.48e-40,1;CL:0000216,1.48e-40,1;CL:0000154,6.34e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.65e-17;10!UBERON:0005564;6.65e-17;10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.04e-45;8!UBERON:0001136;1.81e-40;1!UBERON:0001343;1.81e-40;1!UBERON:0004910;1.81e-40;1!UBERON:0004813;1.81e-40;1!UBERON:0003135;4.79e-33;11!UBERON:0004909;5.15e-21;2!UBERON:0000991;8.78e-18;21!UBERON:0003101;5.13e-17;22!UBERON:0000079;5.13e-17;22!UBERON:0005904;3.26e-11;4!UBERON:0002323;8.29e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.73e-45,8;UBERON:0001136,1.48e-40,1;UBERON:0001343,1.48e-40,1;UBERON:0004910,1.48e-40,1;UBERON:0005154,1.48e-40,1;UBERON:0005295,1.48e-40,1;UBERON:0004813,1.48e-40,1;UBERON:0005297,1.48e-40,1;UBERON:0005294,1.48e-40,1;UBERON:0010141,1.48e-40,1;UBERON:0005891,1.48e-40,1;UBERON:0003135,3.85e-33,11;UBERON:0004909,4.66e-21,2;UBERON:0000991,7.83e-18,21;UBERON:0009196,7.83e-18,21;UBERON:0009117,7.83e-18,21;UBERON:0005564,7.83e-18,21;UBERON:0004176,4.60e-17,22;UBERON:0003101,4.60e-17,22;UBERON:0000079,4.60e-17,22;UBERON:0005904,3.10e-11,4;UBERON:0002323,1.36e-08,46;UBERON:0003133,2.89e-08,48;UBERON:0004458,4.12e-08,49;UBERON:0003886,1.99e-07,54;UBERON:0005156,7.38e-07,59;UBERON:0000990,7.38e-07,59 | |||
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| ||
|short_description=p@chr18:23668307..23668326,- | |short_description=p@chr18:23668307..23668326,- | ||
}} | }} |
Latest revision as of 00:06, 26 July 2015
Short description: | p@chr18:23668307..23668326, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:23668307..23668326, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.48e-40 | 1 |
seminiferous tubule epithelial cell | 1.48e-40 | 1 |
Sertoli cell | 1.48e-40 | 1 |
protein secreting cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 3.73e-45 | 8 |
mesothelium | 1.48e-40 | 1 |
seminiferous tubule of testis | 1.48e-40 | 1 |
epithelium of male gonad | 1.48e-40 | 1 |
epithelial cord | 1.48e-40 | 1 |
sex cord | 1.48e-40 | 1 |
seminiferous tubule epithelium | 1.48e-40 | 1 |
testis sex cord | 1.48e-40 | 1 |
genital ridge | 1.48e-40 | 1 |
primitive sex cord of indifferent gonad | 1.48e-40 | 1 |
coelomic epithelium | 1.48e-40 | 1 |
male reproductive organ | 3.85e-33 | 11 |
epithelium of gonad | 4.66e-21 | 2 |
gonad | 7.83e-18 | 21 |
indifferent external genitalia | 7.83e-18 | 21 |
indifferent gonad | 7.83e-18 | 21 |
gonad primordium | 7.83e-18 | 21 |
external genitalia | 4.60e-17 | 22 |
male organism | 4.60e-17 | 22 |
male reproductive system | 4.60e-17 | 22 |
duct of male reproductive system | 3.10e-11 | 4 |
body cavity | 1.36e-08 | 46 |
reproductive organ | 2.89e-08 | 48 |
body cavity or lining | 4.12e-08 | 49 |
body cavity precursor | 1.99e-07 | 54 |
reproductive structure | 7.38e-07 | 59 |
reproductive system | 7.38e-07 | 59 |