FFCP PHASE1:Hg19::chr18:28682345..28682369,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1824 | |EntrezGene=1824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3036 | |HGNC=3036 | ||
|TSSclassifier=strong | |||
|UniProt=Q02487 | |UniProt=Q02487 | ||
|association_with_transcript=8bp_to_ENST00000280904_5end | |association_with_transcript=8bp_to_ENST00000280904_5end | ||
|cluster_id=chr18:28682345..28682369,- | |||
|description=CAGE_peak_5_at_DSC2_5end | |description=CAGE_peak_5_at_DSC2_5end | ||
|id=chr18:28682345..28682369,- | |id=chr18:28682345..28682369,- | ||
|ontology_enrichment_celltype=CL:0000066!7.13e-18!254;CL:0000223!5.25e-12!59;CL:0002076!4.95e-10!43 | |ontology_enrichment_celltype=CL:0000066!7.13e-18!254;CL:0000223!5.25e-12!59;CL:0002076!4.95e-10!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.76e-10;42!CL:0002368;9.77e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.51e-22,253;CL:0000223,4.57e-15,58;CL:0002076,4.08e-13,42;CL:0002368,8.73e-08,13 | |||
|ontology_enrichment_development_v019=CL:0000223;1.57e-08;58 | |||
|ontology_enrichment_disease=DOID:305!9.45e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,7.81e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.62e-13!169;UBERON:0000925!8.62e-13!169;UBERON:0006595!8.62e-13!169;UBERON:0000062!1.49e-12!511;UBERON:0001007!1.82e-09!155;UBERON:0001555!1.82e-09!155;UBERON:0007026!1.82e-09!155;UBERON:0004921!2.01e-09!129;UBERON:0004185!2.01e-09!129;UBERON:0000922!6.02e-09!612;UBERON:0005911!1.10e-08!82;UBERON:0000466!7.58e-08!126;UBERON:0007023!1.04e-07!115;UBERON:0000077!1.05e-07!130;UBERON:0000480!1.40e-07!626;UBERON:0000467!1.66e-07!625;UBERON:0000923!1.89e-07!604;UBERON:0005291!1.89e-07!604;UBERON:0006598!1.89e-07!604;UBERON:0002532!1.89e-07!604;UBERON:0000468!2.03e-07!659;UBERON:0002050!2.59e-07!605;UBERON:0005423!2.59e-07!605;UBERON:0005177!7.97e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004807;1.45e-08;22!UBERON:0004921;5.89e-07;33!UBERON:0005911;6.14e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.12e-15,160;UBERON:0000925,7.12e-15,160;UBERON:0006595,7.12e-15,160;UBERON:0004921,1.22e-11,118;UBERON:0001007,1.10e-10,145;UBERON:0001555,1.10e-10,145;UBERON:0007026,1.10e-10,145;UBERON:0005911,9.41e-10,82;UBERON:0005153,1.03e-08,37;UBERON:0005631,2.96e-08,14;UBERON:0000158,2.96e-08,14;UBERON:0001041,4.58e-08,87;UBERON:0005177,6.08e-08,101;UBERON:0005157,1.04e-07,47;UBERON:0001004,5.06e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,2.09340350391728,5.02415155899396,2.37390280405608,0.247532705920093,0,0.672325146451775,0,0,0,0.738726348460727,0,0,0.85870796139317,0.547497700291537,0.502170558379211,0,0,0,0.786728553697808,0,0,2.75826367343678,2.409647350226,2.21852406100073,0,0,0,1.10799081706375,0.401088894940283,0.651032612147555,5.82180233023803,4.53451132426571,7.21211589375722,5.08893835728477,4.1566353805769,0.727752183563449,2.32429036905685,0.411167888021826,0,5.46615545412086,5.37937483711111,1.18241114944293,2.75796544589295,2.5819387343353,0,3.01187743268168,1.09162460023138,0.449446968890169,2.14258724659632,2.56743221660875,0,16.8224163095225,11.369428484433,2.98357325372886,2.03146467040009,1.13477044938228,0,5.27622197039161,2.08593167368081,0.65156653411535,0.605399502633369,1.10483290796269,0,0.845021145247767,0.212604299965044,0.419317291016752,1.01095768031846,1.65194582125657,1.6072558669708,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0,0,0,1.70162670895322,1.55210578223795,2.0202000709419,0.654895377488563,2.18577172975525,3.33705998505986,0,0.522389211897802,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,7.75560528296651,3.05265836499774,0,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3349988682675,14.1827982707234,18.0686895095072,1.70763188581434,5.30119073285941,5.34492137199785,4.66474747569167,5.55105871926382,2.91981887260664,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0.738155454624648,0,0,1.47008711385542,2.53510069643662,6.87979051674338,1.18157981336281,0,1.72183813960359,1.71567810298526,14.1577868177127,1.1240175325762,4.12168786887686,1.38882667737794,0,0,1.44331342025273,2.08674728955138,3.05262605013136,0,0,0,0,0.858486162094873,0.492434012174795,0.936017060556951,1.78357394746474,6.56136837907439,20.8297838966586,12.0508832656029,4.03013352162817,2.03443756959773,3.06706143332169,0,0,0.414656231081544,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,3.91871190177462,1.74306691720059,3.29910870900788,4.86495122564762,3.01354254859276,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,5.24304916763028,5.9832291840805,25.2793463195982,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,1.24060815673732,0.862856803274467,0,3.33440328590885,1.66435439510497,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,10.0253235151642,5.52485933615378,0,0,0,0.902399225814824,2.46449078734127,1.56869953835371,5.84556898613043,3.37765212457202,0,0.170093705276516,0.215915916102139,0,1.62567862526312,0.501689773854853,2.54876273045038,0.831076008928724,2.0148727924996,0,0,1.02580050046556,0.656029291399411,0,3.19427136107939,0.0915694648183434,0.082509499920588,5.74265537996172,1.95018073810956,0,0,0,0,0.137836572484531,0.214840489736547,0,0,0.178064071293475,11.7352289906294,6.1500821556834,3.44554323735377,9.20535805785504,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0.860468113224309,1.8667317792493,0,0,0,0,0,0,2.69421915631434,1.34060455107157,2.17781969722645,4.14232723417828,3.44404298136984,0,5.32116184244011,5.05391480455311,7.10426652925037,3.0585488285695,3.41788312304498,2.1440859791201,1.64544909234478,5.18778648954174,2.16012574895246,2.37937552888281,0,0,1.22520107990516,0,0,0,0,0,0.191505370132367,0,1.29848776109822,0.280797178113459,0,0,0,1.35433422241283,0,0.403599414382095,0,0,0.614481528616916,1.11838053946208,0,0,1.9488432172667,0,0.811367035427949,0,0,2.61996756571508,2.05111450980652,0,0,0,21.4870036263921,11.2846578716403,26.415820380534,0,0.281338832821026,0.667852230137435,0,0.211125408127993,0,2.21027132424918,8.31378067919111,0,0,0,1.43789361835723,1.07412704805365,0,0.295930216910801,2.3948309234694,0,0,0.278304294485554,0,1.04171104434093,2.0990399999087,1.44999915086959,1.0241410345695,8.13611680936852,5.2005289988946,0,0,0.520874984799877,0.885741385813839,0.120596438625408,0,0.221158519862449,0.295547618953547,0.438770794307945,0.10893846351899,1.11538995422883,0.769502585037971,0,49.1101116346568,5.38545866458633,12.2771530271869,11.803042910081,4.76307485689684,10.1276607443541,0,0.156980256395025,1.82832850090172,0.676786981851542,0.980312671588698,0.671286347903371,0.569261198172555,0,1.47698645169619,0.163232808159148,3.1097675715467,0,3.98104772431402,8.75729888583058,2.4441205797345,0,0,0,0.269604531922708,0,0.234264445725339,0,3.7176277597097,0,0,0,0.61214552326098,2.46427660551103,2.1045278718029,2.28114021073944,0,0,0,0,0,0,4.85967267338367,3.5277263069176,1.39294730528644,1.39781334593624,0,0,0,0,3.10364852762942,0,0.90392296312213,0.137041924646751,0.19871461170299,0.126621591911757,1.17330829640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| ||
|short_description=p5@DSC2 | |short_description=p5@DSC2 | ||
}} | }} |
Latest revision as of 04:41, 19 September 2015
Short description: | p5@DSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 8bp_to_ENST00000280904_5end |
EntrezGene: | DSC2 |
HGNC: | 3036 |
UniProt: | Q02487 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.51e-22 | 253 |
endodermal cell | 4.57e-15 | 58 |
endo-epithelial cell | 4.08e-13 | 42 |
respiratory epithelial cell | 8.73e-08 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.12e-15 | 160 |
endoderm | 7.12e-15 | 160 |
presumptive endoderm | 7.12e-15 | 160 |
subdivision of digestive tract | 1.22e-11 | 118 |
digestive system | 1.10e-10 | 145 |
digestive tract | 1.10e-10 | 145 |
primitive gut | 1.10e-10 | 145 |
endo-epithelium | 9.41e-10 | 82 |
epithelial bud | 1.03e-08 | 37 |
extraembryonic membrane | 2.96e-08 | 14 |
membranous layer | 2.96e-08 | 14 |
foregut | 4.58e-08 | 87 |
trunk region element | 6.08e-08 | 101 |
epithelial fold | 1.04e-07 | 47 |
respiratory system | 5.06e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 7.81e-10 | 106 |