FFCP PHASE1:Hg19::chr18:36959116..36959120,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:36959116..36959120,- | |||
|description=CAGE_peak_at_chr18:36959116..36959120,- | |description=CAGE_peak_at_chr18:36959116..36959120,- | ||
|id=chr18:36959116..36959120,- | |id=chr18:36959116..36959120,- | ||
|ontology_enrichment_celltype=CL:0002319!4.61e-07!25 | |ontology_enrichment_celltype=CL:0002319!4.61e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000511;5.92e-26;1!CL:0002625;5.92e-26;1!CL:0002553;5.92e-26;1!CL:0000216;5.92e-26;1!CL:0002535;1.07e-13;2!CL:0000243;8.84e-07;15!CL:0000125;8.84e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.78e-26,1;CL:0002625,2.78e-26,1;CL:0000216,2.78e-26,1;CL:0002553,3.58e-26,1;CL:0002535,1.21e-13,2;CL:0000243,9.10e-07,15;CL:0000125,9.10e-07,15;CL:0000030,9.10e-07,15;CL:0000339,9.10e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006238;5.53e-10;10!UBERON:0003056;1.41e-09;3!CL:0000339;8.84e-07;15 | |||
|ontology_enrichment_disease=DOID:0050687!1.19e-21!143;DOID:305!2.11e-19!106;DOID:162!7.62e-19!235;DOID:14566!4.93e-18!239;DOID:3095!5.88e-08!22;DOID:2994!5.88e-08!22;DOID:3119!3.71e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3093;3.13e-09;11!DOID:3119;4.19e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,3.27e-09,11;DOID:3119,4.19e-08,14 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;5.92e-26;1!UBERON:0001343;5.92e-26;1!UBERON:0004910;5.92e-26;1!UBERON:0004813;5.92e-26;1!UBERON:0006955;1.07e-13;2!UBERON:0004909;1.07e-13;2!UBERON:0004801;1.07e-13;2!UBERON:0005904;1.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.78e-26,1;UBERON:0001343,2.78e-26,1;UBERON:0004910,2.78e-26,1;UBERON:0005154,2.78e-26,1;UBERON:0005295,2.78e-26,1;UBERON:0004813,2.78e-26,1;UBERON:0005297,2.78e-26,1;UBERON:0005294,2.78e-26,1;UBERON:0010141,2.78e-26,1;UBERON:0005891,2.78e-26,1;UBERON:0004909,7.30e-14,2;UBERON:0006955,1.21e-13,2;UBERON:0004801,1.21e-13,2;UBERON:0005904,1.40e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0.308097234229289,0.307007349452259,0.551346289938122,0.214840489736547,0.290033387828457,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0.318852545457645,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0.284136146806413,0,0.296964680832639,0,0,0,0,0,1.05562704063997,0,0,1.25966373927138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0.472775363535873,0.689486746482929,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0.41827123283581,0,0,0,0,0.108647371922008,0,0,0,0,0.31396051279005,0.664846727600626,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0,0.450970258243478,0.311064574191741,0,0,0,0,0.284609546029793,0,0,0.489961987071888,0.0870592065804026,0,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0,0,0.411125773940253,0,0,0.391102765469606,0.160317640503067,0.213452994739353,0.19980960958213,0,0.572682980829578,0.343189995723929,0,0,0,0.407712618220842,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.393915911536118,0.0824158583811665,0.404421263125109,0,0,0,0,0.321506296930038,0.825236619583403,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,1.24513771442608,0.499921631848426,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0.398095888698616,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,0.244736704506468,0,0,0,0,0,0.168942440653073,0.512483037175893,0,0,0,0,0,0,0,0.245772908753719,0,0,0.426766918776564,0,0,0,0,0,0.511577485214607,0,0,0.218419276384028,0.848662649770126,0.850299680406731,0.371807292777007,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.523813388962845,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0.236387681767936,0.111231401892069,0,0,0,0,0.215927591218621,0,0,1.58013611732727,0.697448552208751,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38216317774326,0.118920090777569,0,0,0.905777061400041,0,0,1.41095188908457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0.126698501011437,0.101988829741982,0.26721740526556,0.0918948995348449,0.250707539292375,0,0,0,0,0,0.23806443146374,0,0,0.112131862580613,0,0,0,0,0,0,0,0.325613074443898,0.533636729388577,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p@chr18:36959116..36959120,- | |short_description=p@chr18:36959116..36959120,- | ||
}} | }} |
Latest revision as of 00:48, 26 July 2015
Short description: | p@chr18:36959116..36959120, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:36959116..36959120, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.78e-26 | 1 |
seminiferous tubule epithelial cell | 2.78e-26 | 1 |
Sertoli cell | 2.78e-26 | 1 |
lung fibroblast | 3.58e-26 | 1 |
epithelial cell of cervix | 1.21e-13 | 2 |
glial cell (sensu Vertebrata) | 9.10e-07 | 15 |
glial cell | 9.10e-07 | 15 |
glioblast | 9.10e-07 | 15 |
glioblast (sensu Vertebrata) | 9.10e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 2.78e-26 | 1 |
seminiferous tubule of testis | 2.78e-26 | 1 |
epithelium of male gonad | 2.78e-26 | 1 |
epithelial cord | 2.78e-26 | 1 |
sex cord | 2.78e-26 | 1 |
seminiferous tubule epithelium | 2.78e-26 | 1 |
testis sex cord | 2.78e-26 | 1 |
genital ridge | 2.78e-26 | 1 |
primitive sex cord of indifferent gonad | 2.78e-26 | 1 |
coelomic epithelium | 2.78e-26 | 1 |
epithelium of gonad | 7.30e-14 | 2 |
uterine epithelium | 1.21e-13 | 2 |
cervix epithelium | 1.21e-13 | 2 |
duct of male reproductive system | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 3.27e-09 | 11 |
gastrointestinal system cancer | 4.19e-08 | 14 |