FFCP PHASE1:Hg19::chr13:107613733..107613738,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:107613733..107613738,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr13:107613733..107613738,- | |description=CAGE_peak_at_chr13:107613733..107613738,- | ||
|id=chr13:107613733..107613738,- | |id=chr13:107613733..107613738,- | ||
|ontology_enrichment_celltype=CL:0002563!3.31e-40!4;CL:0002253!3.81e-21!2;CL:0002231!1.83e-14!3;CL:0000223!2.13e-11!59;CL:0002076!4.45e-09!43;CL:0002251!1.48e-08!21 | |ontology_enrichment_celltype=CL:0002563!3.31e-40!4;CL:0002253!3.81e-21!2;CL:0002231!1.83e-14!3;CL:0000223!2.13e-11!59;CL:0002076!4.45e-09!43;CL:0002251!1.48e-08!21 | ||
|ontology_enrichment_celltype_v019=CL:0002253;4.52e-50;2!CL:0002563;7.14e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.52e-50,2;CL:0002563,7.14e-26,4 | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.90e-14;31!UBERON:0004161;2.16e-10;11!UBERON:0009497;5.28e-09;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3119;2.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,2.00e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001242!3.31e-40!4;UBERON:0001262!3.31e-40!4;UBERON:0004786!3.31e-40!4;UBERON:0004808!3.31e-40!4;UBERON:0001277!3.31e-40!4;UBERON:0003350!1.99e-32!5;UBERON:0003929!6.22e-19!54;UBERON:0000485!1.48e-18!9;UBERON:0000344!3.36e-14!12;UBERON:0000060!3.36e-14!12;UBERON:0005911!1.04e-12!82;UBERON:0001052!2.80e-11!4;UBERON:0002107!2.08e-09!19;UBERON:0006925!2.08e-09!19;UBERON:0008836!2.08e-09!19;UBERON:0001046!2.26e-09!19;UBERON:0004907!2.74e-09!5;UBERON:0008835!2.93e-08!22;UBERON:0003894!2.93e-08!22;UBERON:0004921!3.09e-08!129;UBERON:0004185!3.09e-08!129;UBERON:0009854!6.08e-08!23;UBERON:0000490!8.63e-08!138;UBERON:0007499!2.20e-07!25;UBERON:0009497!2.20e-07!25;UBERON:0000015!2.20e-07!25;UBERON:0002423!2.20e-07!25;UBERON:0006235!2.20e-07!25;UBERON:0004161!2.20e-07!25;UBERON:0005057!3.90e-07!26;UBERON:0009856!3.90e-07!26;UBERON:0001007!5.97e-07!155;UBERON:0001555!5.97e-07!155;UBERON:0007026!5.97e-07!155;UBERON:0002530!7.68e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;7.14e-26;4!UBERON:0001242;7.14e-26;4!UBERON:0001262;7.14e-26;4!UBERON:0004786;7.14e-26;4!UBERON:0004808;7.14e-26;4!UBERON:0001277;7.14e-26;4!UBERON:0004907;5.15e-21;5!UBERON:0000485;1.91e-15;7!UBERON:0003929;1.91e-15;7!UBERON:0003350;1.07e-13;8!UBERON:0001155;2.45e-12;9!UBERON:0000059;2.37e-10;11!UBERON:0000160;7.60e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,7.14e-26,4;UBERON:0001242,7.14e-26,4;UBERON:0001262,7.14e-26,4;UBERON:0004786,7.14e-26,4;UBERON:0004808,7.14e-26,4;UBERON:0001277,7.14e-26,4;UBERON:0004907,5.15e-21,5;UBERON:0003350,1.07e-13,8;UBERON:0001155,2.45e-12,9;UBERON:0000485,2.45e-12,9;UBERON:0000059,2.37e-10,11;UBERON:0003929,1.34e-08,54;UBERON:0000160,7.60e-07,17 | |||
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|short_description=p@chr13:107613733..107613738,- | |short_description=p@chr13:107613733..107613738,- | ||
}} | }} |
Latest revision as of 14:22, 24 July 2015
Short description: | p@chr13:107613733..107613738, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:107613733..107613738, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.52e-50 | 2 |
intestinal epithelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
rectum | 7.14e-26 | 4 |
intestinal mucosa | 7.14e-26 | 4 |
wall of intestine | 7.14e-26 | 4 |
gastrointestinal system mucosa | 7.14e-26 | 4 |
gastrointestinal system epithelium | 7.14e-26 | 4 |
intestinal epithelium | 7.14e-26 | 4 |
lower digestive tract | 5.15e-21 | 5 |
epithelium of mucosa | 1.07e-13 | 8 |
colon | 2.45e-12 | 9 |
simple columnar epithelium | 2.45e-12 | 9 |
large intestine | 2.37e-10 | 11 |
gut epithelium | 1.34e-08 | 54 |
intestine | 7.60e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 2.00e-08 | 14 |