FFCP PHASE1:Hg19::chr13:40924543..40924552,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-103bp_to_ENST00000400432_5end | |association_with_transcript=-103bp_to_ENST00000400432_5end | ||
|cluster_id=chr13:40924543..40924552,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_ENST00000400432_5end | |description=CAGE_peak_3_at_ENST00000400432_5end | ||
|id=chr13:40924543..40924552,- | |id=chr13:40924543..40924552,- | ||
|ontology_enrichment_celltype=CL:0000136!1.68e-13!15 | |ontology_enrichment_celltype=CL:0000136!1.68e-13!15 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!8.35e-18!2;UBERON:0006122!1.43e-09!1;UBERON:0000989!1.99e-09!1;UBERON:0008811!1.99e-09!1;UBERON:0006258!1.99e-09!1;UBERON:0005876!1.99e-09!1;UBERON:0004874!1.99e-09!1;UBERON:0003296!2.35e-09!4;UBERON:0010133!2.35e-09!4;UBERON:0001154!3.00e-09!1;UBERON:0001153!3.00e-09!1;UBERON:0000310!8.54e-08!10;UBERON:0001443!3.98e-07!11 | |ontology_enrichment_uberon=UBERON:0000007!8.35e-18!2;UBERON:0006122!1.43e-09!1;UBERON:0000989!1.99e-09!1;UBERON:0008811!1.99e-09!1;UBERON:0006258!1.99e-09!1;UBERON:0005876!1.99e-09!1;UBERON:0004874!1.99e-09!1;UBERON:0003296!2.35e-09!4;UBERON:0010133!2.35e-09!4;UBERON:0001154!3.00e-09!1;UBERON:0001153!3.00e-09!1;UBERON:0000310!8.54e-08!10;UBERON:0001443!3.98e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.34e-79;2!UBERON:0003296;2.22e-40;4!UBERON:0010133;2.22e-40;4!UBERON:0001894;1.28e-23;7!UBERON:0002368;5.76e-16;33!UBERON:0000949;2.08e-10;43!UBERON:0002107;2.21e-09;19!UBERON:0006925;2.21e-09;19!UBERON:0002423;2.31e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.34e-79,2;UBERON:0003296,2.22e-40,4;UBERON:0010133,2.22e-40,4;UBERON:0001894,1.28e-23,7;UBERON:0006222,1.28e-23,7;UBERON:0002368,8.68e-19,35;UBERON:0000949,8.74e-15,45;UBERON:0002530,1.91e-11,59;UBERON:0002107,2.17e-09,19;UBERON:0006925,2.17e-09,19;UBERON:0008836,2.17e-09,19;UBERON:0008835,3.04e-08,22;UBERON:0003894,3.04e-08,22;UBERON:0009854,6.29e-08,23;UBERON:0007499,2.28e-07,25;UBERON:0009497,2.28e-07,25;UBERON:0000015,2.28e-07,25;UBERON:0002423,2.28e-07,25;UBERON:0006235,2.28e-07,25;UBERON:0004161,2.28e-07,25;UBERON:0009856,4.02e-07,26 | |||
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|short_description=p3@ENST00000400432 | |short_description=p3@ENST00000400432 | ||
}} | }} |
Latest revision as of 15:57, 24 July 2015
Short description: | p3@ENST00000400432 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000400432_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -103bp_to_ENST00000400432_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.34e-79 | 2 |
gland of diencephalon | 2.22e-40 | 4 |
neuroendocrine gland | 2.22e-40 | 4 |
diencephalon | 1.28e-23 | 7 |
future diencephalon | 1.28e-23 | 7 |
endocrine gland | 8.68e-19 | 35 |
endocrine system | 8.74e-15 | 45 |
gland | 1.91e-11 | 59 |
liver | 2.17e-09 | 19 |
digestive gland | 2.17e-09 | 19 |
liver bud | 2.17e-09 | 19 |
hepatic diverticulum | 3.04e-08 | 22 |
liver primordium | 3.04e-08 | 22 |
digestive tract diverticulum | 6.29e-08 | 23 |
epithelial sac | 2.28e-07 | 25 |
epithelium of foregut-midgut junction | 2.28e-07 | 25 |
anatomical boundary | 2.28e-07 | 25 |
hepatobiliary system | 2.28e-07 | 25 |
foregut-midgut junction | 2.28e-07 | 25 |
septum transversum | 2.28e-07 | 25 |
sac | 4.02e-07 | 26 |