FFCP PHASE1:Hg19::chr11:119289293..119289305,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:119289293..119289305,-
|short_description=p12@THY1
|description=CAGE_peak_12_at_THY1_5end
|association_with_transcript=180bp_to_AK314018_5end
|EntrezGene...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7070 | |EntrezGene=7070 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11801 | |HGNC=11801 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBB0 | |UniProt=Q9HBB0 | ||
|association_with_transcript=180bp_to_AK314018_5end | |||
|cluster_id=chr11:119289293..119289305,- | |||
|coexpression_cluster_id=C879 | |||
|description=CAGE_peak_12_at_THY1_5end | |||
|id=chr11:119289293..119289305,- | |||
|ontology_enrichment_celltype=CL:0000057!1.03e-16!75;CL:0000055!2.78e-14!180;CL:0002334!3.72e-09!12;CL:0002620!5.57e-08!23;CL:0000136!2.13e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000135;2.19e-13;3!CL:0000388;2.19e-13;3!CL:0002570;5.83e-12;8!CL:0000136;9.36e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,7.19e-16,15;CL:0000135,2.21e-13,3;CL:0000388,2.21e-13,3;CL:0002570,9.25e-12,8;CL:0000057,8.45e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3350;1.98e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3350,2.69e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.63e-09!32;UBERON:0001893!2.97e-09!34;UBERON:0002020!3.23e-09!34;UBERON:0003528!3.23e-09!34;UBERON:0002791!1.01e-08!33;UBERON:0001013!3.25e-08!14;UBERON:0001049!3.73e-08!57;UBERON:0005068!3.73e-08!57;UBERON:0006241!3.73e-08!57;UBERON:0007135!3.73e-08!57;UBERON:0002780!4.55e-08!41;UBERON:0001890!4.55e-08!41;UBERON:0006240!4.55e-08!41;UBERON:0000956!5.43e-08!25;UBERON:0000203!5.43e-08!25;UBERON:0000475!6.04e-08!365;UBERON:0002199!6.47e-08!45;UBERON:0002416!6.47e-08!45;UBERON:0005743!6.80e-08!86;UBERON:0002619!9.39e-08!22;UBERON:0003080!1.06e-07!42;UBERON:0001950!1.57e-07!20;UBERON:0001017!2.48e-07!82;UBERON:0000955!3.20e-07!69;UBERON:0006238!3.20e-07!69;UBERON:0000033!4.33e-07!123;UBERON:0002616!6.15e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;6.09e-21;14!UBERON:0007846;2.19e-13;3!UBERON:0000043;2.19e-13;3!UBERON:0007845;2.19e-13;3!UBERON:0005406;1.98e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,5.75e-21,14;UBERON:0007846,2.21e-13,3;UBERON:0000043,2.21e-13,3;UBERON:0007845,2.21e-13,3;UBERON:0005406,8.51e-09,2 | |||
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| ||
|short_description=p12@THY1 | |||
}} | }} |
Latest revision as of 03:52, 16 September 2015
Short description: | p12@THY1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_THY1_5end |
Coexpression cluster: | C879_Osteoblast_Adipocyte_Olfactory_leiomyoma_Smooth_tenocyte_Fibroblast |
Association with transcript: | 180bp_to_AK314018_5end |
EntrezGene: | THY1 |
HGNC: | 11801 |
UniProt: | Q9HBB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 7.19e-16 | 15 |
fibrocyte | 2.21e-13 | 3 |
tendon cell | 2.21e-13 | 3 |
mesenchymal stem cell of adipose | 9.25e-12 | 8 |
fibroblast | 8.45e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 5.75e-21 | 14 |
dense regular connective tissue | 2.21e-13 | 3 |
tendon | 2.21e-13 | 3 |
regular connective tissue | 2.21e-13 | 3 |
perirenal fat | 8.51e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 2.69e-08 | 2 |