FFCP PHASE1:Hg19::chr13:99229303..99229309,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8428 | |EntrezGene=8428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11403 | |HGNC=11403 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCB9,E9PCB4,F5H2G3 | |UniProt=E9PCB9,E9PCB4,F5H2G3 | ||
|association_with_transcript=42bp_to_ENST00000376533,ENST00000376541,ENST00000543110_5end | |association_with_transcript=42bp_to_ENST00000376533,ENST00000376541,ENST00000543110_5end | ||
|cluster_id=chr13:99229303..99229309,- | |||
|description=CAGE_peak_3_at_STK24_5end | |description=CAGE_peak_3_at_STK24_5end | ||
|id=chr13:99229303..99229309,- | |id=chr13:99229303..99229309,- | ||
|ontology_enrichment_celltype=CL:0000066!1.97e-15!254;CL:0000860!2.55e-12!45;CL:0000766!3.09e-12!76;CL:0002076!3.37e-12!43;CL:0002057!5.68e-12!42;CL:0000223!3.29e-11!59;CL:0000839!5.95e-11!70;CL:0002194!3.91e-10!63;CL:0000576!3.91e-10!63;CL:0000040!3.91e-10!63;CL:0000559!3.91e-10!63;CL:0000557!5.29e-10!71;CL:0002009!5.06e-09!65 | |ontology_enrichment_celltype=CL:0000066!1.97e-15!254;CL:0000860!2.55e-12!45;CL:0000766!3.09e-12!76;CL:0002076!3.37e-12!43;CL:0002057!5.68e-12!42;CL:0000223!3.29e-11!59;CL:0000839!5.95e-11!70;CL:0002194!3.91e-10!63;CL:0000576!3.91e-10!63;CL:0000040!3.91e-10!63;CL:0000559!3.91e-10!63;CL:0000557!5.29e-10!71;CL:0002009!5.06e-09!65 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.20e-10;33!CL:0002057;7.20e-10;33!CL:0002076;6.08e-09;42!CL:0000576;1.86e-07;48!CL:0000473;3.99e-07;39!CL:0000234;3.99e-07;39!CL:0002251;7.54e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.92e-15,253;CL:0000766,1.42e-12,72;CL:0002076,1.46e-12,42;CL:0000860,4.06e-12,42;CL:0002057,4.06e-12,42;CL:0000223,9.95e-12,58;CL:0000839,3.80e-11,66;CL:0002194,2.50e-10,59;CL:0000576,2.50e-10,59;CL:0000040,2.50e-10,59;CL:0000559,2.50e-10,59;CL:0000473,3.26e-10,48;CL:0000234,3.26e-10,48;CL:0000557,3.80e-10,67;CL:0002009,3.79e-09,61;CL:0002251,4.35e-07,20 | |||
|ontology_enrichment_development_v019=CL:0002057;7.85e-09;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000480!1.65e-10!626;UBERON:0000467!1.75e-10!625;UBERON:0000922!5.68e-10!612;UBERON:0000923!9.63e-10!604;UBERON:0005291!9.63e-10!604;UBERON:0006598!9.63e-10!604;UBERON:0002532!9.63e-10!604;UBERON:0002050!1.71e-09!605;UBERON:0005423!1.71e-09!605;UBERON:0000468!2.13e-09!659;UBERON:0000062!1.62e-08!511;UBERON:0004119!1.63e-08!169;UBERON:0000925!1.63e-08!169;UBERON:0006595!1.63e-08!169;UBERON:0001474!1.24e-07!86;UBERON:0002371!1.66e-07!80;UBERON:0004765!1.79e-07!101;UBERON:0001434!1.79e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,1.57e-08,592;UBERON:0001474,1.47e-07,82;UBERON:0002371,1.62e-07,76;UBERON:0005423,2.18e-07,581;UBERON:0004119,3.48e-07,160;UBERON:0000925,3.48e-07,160;UBERON:0006595,3.48e-07,160 | |||
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| ||
|short_description=p3@STK24 | |short_description=p3@STK24 | ||
}} | }} |
Latest revision as of 07:44, 18 September 2015
Short description: | p3@STK24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STK24_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000376533, ENST00000376541, ENST00000543110_5end |
EntrezGene: | STK24 |
HGNC: | 11403 |
UniProt: | E9PCB9E9PCB4F5H2G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.92e-15 | 253 |
myeloid leukocyte | 1.42e-12 | 72 |
endo-epithelial cell | 1.46e-12 | 42 |
classical monocyte | 4.06e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.06e-12 | 42 |
endodermal cell | 9.95e-12 | 58 |
myeloid lineage restricted progenitor cell | 3.80e-11 | 66 |
monopoietic cell | 2.50e-10 | 59 |
monocyte | 2.50e-10 | 59 |
monoblast | 2.50e-10 | 59 |
promonocyte | 2.50e-10 | 59 |
defensive cell | 3.26e-10 | 48 |
phagocyte | 3.26e-10 | 48 |
granulocyte monocyte progenitor cell | 3.80e-10 | 67 |
macrophage dendritic cell progenitor | 3.79e-09 | 61 |
epithelial cell of alimentary canal | 4.35e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
embryo | 1.57e-08 | 592 |
bone element | 1.47e-07 | 82 |
bone marrow | 1.62e-07 | 76 |
developing anatomical structure | 2.18e-07 | 581 |
endoderm-derived structure | 3.48e-07 | 160 |
endoderm | 3.48e-07 | 160 |
presumptive endoderm | 3.48e-07 | 160 |