FFCP PHASE1:Hg19::chr19:39019210..39019227,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:39019210..39019227,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr19:39019210..39019227,+ | |description=CAGE_peak_at_chr19:39019210..39019227,+ | ||
|id=chr19:39019210..39019227,+ | |id=chr19:39019210..39019227,+ | ||
|ontology_enrichment_celltype=CL:0000039!4.57e-10!7;CL:0000586!4.57e-10!7;CL:0000242!1.24e-09!2 | |ontology_enrichment_celltype=CL:0000039!4.57e-10!7;CL:0000586!4.57e-10!7;CL:0000242!1.24e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.79e-15;7!CL:0000586;3.79e-15;7!CL:0000123;9.40e-14;2!CL:0000242;9.40e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.53e-15,7;CL:0000586,3.53e-15,7;CL:0000242,9.40e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.76e-23;10!UBERON:0005564;4.76e-23;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;5.55e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,5.75e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001950!3.17e-21!20;UBERON:0002020!1.60e-19!34;UBERON:0003528!1.60e-19!34;UBERON:0002619!3.52e-19!22;UBERON:0001869!7.67e-18!32;UBERON:0002791!3.12e-17!33;UBERON:0000956!1.06e-16!25;UBERON:0000203!1.06e-16!25;UBERON:0001893!1.17e-16!34;UBERON:0002780!9.97e-16!41;UBERON:0001890!9.97e-16!41;UBERON:0006240!9.97e-16!41;UBERON:0003080!2.74e-15!42;UBERON:0000473!1.26e-13!8;UBERON:0000955!2.09e-12!69;UBERON:0006238!2.09e-12!69;UBERON:0001049!2.78e-12!57;UBERON:0005068!2.78e-12!57;UBERON:0006241!2.78e-12!57;UBERON:0007135!2.78e-12!57;UBERON:0002616!9.24e-12!59;UBERON:0001017!6.81e-10!82;UBERON:0003135!8.22e-10!11;UBERON:0003056!1.17e-09!61;UBERON:0005743!2.84e-09!86;UBERON:0000073!3.28e-09!94;UBERON:0001016!3.28e-09!94;UBERON:0007023!3.39e-08!115;UBERON:0002021!4.67e-08!5;UBERON:0001872!1.21e-07!5;UBERON:0000153!1.65e-07!129;UBERON:0007811!1.65e-07!129;UBERON:0000033!3.74e-07!123;UBERON:0003075!4.14e-07!86;UBERON:0007284!4.14e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.36e-28;8!UBERON:0003135;4.98e-21;11!UBERON:0000991;2.26e-11;21!UBERON:0003101;6.93e-11;22!UBERON:0000079;6.93e-11;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.23e-28,8;UBERON:0003135,4.65e-21,11;UBERON:0000991,2.18e-11,21;UBERON:0009196,2.18e-11,21;UBERON:0009117,2.18e-11,21;UBERON:0005564,2.18e-11,21;UBERON:0004176,6.70e-11,22;UBERON:0003101,6.70e-11,22;UBERON:0000079,6.70e-11,22 | |||
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| ||
|short_description=p@chr19:39019210..39019227,+ | |short_description=p@chr19:39019210..39019227,+ | ||
}} | }} |
Latest revision as of 07:21, 26 July 2015
Short description: | p@chr19:39019210..39019227, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:39019210..39019227, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.53e-15 | 7 |
germ cell | 3.53e-15 | 7 |
Merkel cell | 9.40e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.23e-28 | 8 |
male reproductive organ | 4.65e-21 | 11 |
gonad | 2.18e-11 | 21 |
indifferent external genitalia | 2.18e-11 | 21 |
indifferent gonad | 2.18e-11 | 21 |
gonad primordium | 2.18e-11 | 21 |
external genitalia | 6.70e-11 | 22 |
male organism | 6.70e-11 | 22 |
male reproductive system | 6.70e-11 | 22 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 5.75e-08 | 14 |