FFCP PHASE1:Hg19::chr19:42928426..42928438,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=G5E9L7 | |UniProt=G5E9L7 | ||
|association_with_transcript=5bp_to_ENST00000457234_5end | |association_with_transcript=5bp_to_ENST00000457234_5end | ||
|cluster_id=chr19:42928426..42928438,+ | |||
|coexpression_cluster_id=C76 | |||
|description=CAGE_peak_2_at_ENST00000457234_5end | |description=CAGE_peak_2_at_ENST00000457234_5end | ||
|id=chr19:42928426..42928438,+ | |id=chr19:42928426..42928438,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;1.43e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.43e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.48e-10;2!UBERON:0009117;3.14e-08;10!UBERON:0005564;3.14e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.26e-43!57;UBERON:0005068!3.26e-43!57;UBERON:0006241!3.26e-43!57;UBERON:0007135!3.26e-43!57;UBERON:0002780!4.88e-39!41;UBERON:0001890!4.88e-39!41;UBERON:0006240!4.88e-39!41;UBERON:0003080!6.08e-38!42;UBERON:0007023!9.59e-37!115;UBERON:0002616!3.90e-36!59;UBERON:0000955!5.57e-36!69;UBERON:0006238!5.57e-36!69;UBERON:0005743!5.10e-35!86;UBERON:0001017!6.89e-33!82;UBERON:0000073!9.69e-31!94;UBERON:0001016!9.69e-31!94;UBERON:0002346!2.37e-29!90;UBERON:0003075!2.79e-29!86;UBERON:0007284!2.79e-29!86;UBERON:0003056!3.87e-28!61;UBERON:0001893!4.75e-28!34;UBERON:0002020!6.29e-28!34;UBERON:0003528!6.29e-28!34;UBERON:0002791!3.67e-26!33;UBERON:0001869!2.41e-24!32;UBERON:0000153!2.29e-22!129;UBERON:0007811!2.29e-22!129;UBERON:0000033!3.73e-21!123;UBERON:0002619!2.96e-19!22;UBERON:0001950!2.03e-18!20;UBERON:0000956!1.30e-16!25;UBERON:0000203!1.30e-16!25;UBERON:0000924!7.27e-16!173;UBERON:0006601!7.27e-16!173;UBERON:0004121!1.77e-15!169;UBERON:0002308!8.40e-14!9;UBERON:0000125!8.40e-14!9;UBERON:0001894!2.54e-13!7;UBERON:0006222!2.54e-13!7;UBERON:0001872!7.22e-13!5;UBERON:0002420!1.38e-10!9;UBERON:0007245!1.38e-10!9;UBERON:0010009!1.38e-10!9;UBERON:0010011!1.38e-10!9;UBERON:0000454!1.38e-10!9;UBERON:0002298!1.52e-10!8;UBERON:0009663!9.92e-10!7;UBERON:0000025!1.80e-08!194;UBERON:0006331!3.54e-08!3;UBERON:0000988!4.65e-08!3;UBERON:0000475!2.03e-07!365;UBERON:0003076!3.38e-07!15;UBERON:0003057!3.38e-07!15;UBERON:0000369!5.65e-07!4;UBERON:0002435!5.65e-07!4;UBERON:0000204!5.65e-07!4;UBERON:0010082!5.65e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.43e-10;2!UBERON:0004801;1.43e-10;2!UBERON:0001905;2.48e-10;2!UBERON:0001873;2.48e-10;2!UBERON:0002757;2.48e-10;2!UBERON:0010134;2.48e-10;2!UBERON:0005408;2.48e-10;2!UBERON:0001899;2.48e-10;2!UBERON:0000473;4.62e-10;8!UBERON:0003135;1.46e-07;11!UBERON:0002114;2.63e-07;2!UBERON:0005383;2.63e-07;3!UBERON:0005382;2.63e-07;3!UBERON:0002780;6.70e-07;41!UBERON:0001890;6.70e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,1.43e-10,2;UBERON:0004801,1.43e-10,2;UBERON:0001873,2.72e-10,2;UBERON:0010122,2.72e-10,2;UBERON:0001905,3.27e-10,2;UBERON:0002757,3.27e-10,2;UBERON:0010134,3.27e-10,2;UBERON:0005408,3.27e-10,2;UBERON:0001899,3.27e-10,2;UBERON:0000473,4.22e-10,8;UBERON:0003135,1.37e-07,11;UBERON:0002114,2.47e-07,2;UBERON:0005383,2.79e-07,3;UBERON:0005382,2.79e-07,3;UBERON:0002780,4.03e-07,41;UBERON:0001890,4.03e-07,41;UBERON:0003080,4.03e-07,41;UBERON:0006240,4.03e-07,41 | |||
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| ||
|short_description=p2@ENST00000457234 | |short_description=p2@ENST00000457234 | ||
}} | }} |
Latest revision as of 09:37, 18 September 2015
Short description: | p2@ENST00000457234 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000457234_5end |
Coexpression cluster: | C76_argyrophil_gastrointestinal_temporal_duodenum_neuroblastoma_merkel_smallcell |
Association with transcript: | 5bp_to_ENST00000457234_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.43e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 1.43e-10 | 2 |
cervix epithelium | 1.43e-10 | 2 |
caudate nucleus | 2.72e-10 | 2 |
future caudate nucleus | 2.72e-10 | 2 |
pineal body | 3.27e-10 | 2 |
regional part of epithalamus | 3.27e-10 | 2 |
secretory circumventricular organ | 3.27e-10 | 2 |
circumventricular organ | 3.27e-10 | 2 |
epithalamus | 3.27e-10 | 2 |
testis | 4.22e-10 | 8 |
male reproductive organ | 1.37e-07 | 11 |
duodenum | 2.47e-07 | 2 |
caudate-putamen | 2.79e-07 | 3 |
dorsal striatum | 2.79e-07 | 3 |
regional part of forebrain | 4.03e-07 | 41 |
forebrain | 4.03e-07 | 41 |
anterior neural tube | 4.03e-07 | 41 |
future forebrain | 4.03e-07 | 41 |