FFCP PHASE1:Hg19::chr19:49652811..49652835,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8541 | |EntrezGene=8541 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9247 | |HGNC=9247 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-379bp_to_AK001525_5end | |association_with_transcript=-379bp_to_AK001525_5end | ||
|cluster_id=chr19:49652811..49652835,+ | |||
|description=CAGE_peak_10_at_PPFIA3_5end | |description=CAGE_peak_10_at_PPFIA3_5end | ||
|id=chr19:49652811..49652835,+ | |id=chr19:49652811..49652835,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.67e-20!254 | |ontology_enrichment_celltype=CL:0000066!3.67e-20!254 | ||
|ontology_enrichment_celltype_v019=CL:0002322;9.15e-13;5!CL:0000540;9.59e-07;6!CL:0000404;9.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.82e-13,5;CL:0000066,8.69e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000031;9.59e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!1.41e-13!143;DOID:305!1.00e-10!106;DOID:162!9.35e-10!235;DOID:14566!2.40e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;3.67e-09;4!DOID:1612;3.67e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.21e-09,4;DOID:1612,3.21e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0005153!5.69e-08!37 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,1.05506791291381,0.247532705920093,0.331397375727916,0,1.20538905604795,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,2.71085326900425,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.151357427644931,0.576175924479999,0.468642863667593,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0.193260853163297,0.272746120590835,0,1.58565817968474,2.65059536642971,2.09149097165133,0.932949495138334,2.01856680700503,2.91981887260664,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0.768251997860379,1.1240175325762,0.201057944823262,0.462942225792648,0,0,0,0,0.352226082707465,0,0.925971025153221,0.190254152234598,3.95102198979638,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.358234090811393,0.871901815541886,1.15014803749563,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0.763976851116555,0,0,0.102827492703324,0.600686115687835,0.571652865261156,0.224262168690721,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,3.32870879020994,2.72151263996712,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0.40101294060657,0.368323955743585,0,0,0.131124414959424,0,0.385076685522074,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,1.54227252690289,0,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0.145016693914229,0,0.356128142586949,0.495854746082934,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.429374660225974,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0,0.353437207037059,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.384888450902048,0,1.08890984861323,0.0941438007767792,0.43050537267123,1.68471475667626,2.66058092122005,0,0,0,0,0,0,0,0,0,1.70918513803957,0,0.980160863924127,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.748562161632879,0.146508179271894,1.57768678274367,0,1.13654458722565,0.23874448473769,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,1.05562704063997,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0.449341755736634,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,1.04171104434093,1.66173999992772,0,0.455173793141999,0.508507300585533,0.472775363535873,1.03423011972439,5.24888304089858,0.347249989866585,0.885741385813839,0,0,0.221158519862449,0.886642856860642,0.219385397153973,0.10893846351899,0.41827123283581,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.217294743844016,0,0.0915975934018623,0,0,0.470940769185074,0,0.225595660617181,0.588187602953219,0.503464760927528,0.37950746544837,0,0.632994193584081,0,0.706765357169704,0.216388639742091,6.96683351754953,0.619202951523374,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,2.41981432097328,1.53036380815245,0,3.45743864653333,0.518440956986236,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0.609414446062818,0,0.51595809741485,0.19351266257817,0.65780385377567,0.246346371159628,0.193978032976839,0.353024506766001,0.451961481561065,0,0.397429223405979,0.189932387867636,0,0.400794101257669,0.213452994739353,1.19885765749278,0.144090417154106,0.80175617316141,0.343189995723929,0.288109595976299,0.248505071130865,0.235694034616795,0.135904206073614,0,0.509991088181609,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0.134366944973453,0,0,0.157566364614447,0,0.13480708770837,0.0984274815147488,0,0,0,3.05430982083536,3.16340704173638,3.32352270423348,0,1.5476039091159,0.121499113316049,3.01891218839339,0.157611414598396,0.314727528809989,0.105600336519406,0.717149357331379,0.767660789277781,0,0.662091970365432,1.017074150619,0,0.864221491201268,0,1.19730191562487,0.246277562248017,0.170388021785422,0.226624183040251,0.146552233678082,1.32506888912221,0.258565912723101,0.26446520348538,0.513260513652988,0.704815022316672,0.854299300541557,0,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0.415045904808692,0.124980407962107,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0.192619830407303,0,1.04397716786085,0,0.463044948647668,0,0.179088841081487,0,0,0.530067437837643,0.192914038270915,0,0.256241518587947,1.38172136692479,0,0,0.389720617678777,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0.320075189082423,0,0.567515953566836,0,0.139879507719444,2.48830904013189,0,0,0.629063767423586,0.327628914576042,0.678930119816101,0.212574920101683,0.743614585554013,0,0,0.23658523500376,0,0,0,0.128458450192919,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.196295437002051,0.589848616738702,0,0.346576998451015,0,0,0.397832444232549,0.0752103283492573,0.40341013740704,0,0.261906694481422,0.49131575253029,0,0.202612753855184,0,0.620060389503552,0,1.09394961803644,0.548257766857182,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.131545547125698,0.236387681767936,2.44709084162552,0.627944742804112,0,0.280272163313789,1.82631744101899,0.863710364874486,0.47775168788705,0,0.158013611732727,1.62737995515375,0.173858272302579,0,0.828864656652147,0.3414369541879,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0.487671699929078,0,0,0,0,0.935757853848423,1.19370465096821,0.237840181555137,0.11294608203896,0.329821550236287,0.452888530700021,0.308696632431779,0,0,0,0.707029641304878,0,0,0.4226557275834,0,0,0,0,0,0,0.401206833445841,0,0,0,1.10440093535229,0.271965960763659,2.18175345170189,0,0,0,0,1.64016352285603,0,1.64708051314868,0,1.06886962106224,0.459474497674225,1.0028301571695,0.151557396436479,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,0.12729431655633,0,0,0.342233301085281,0.134704106029175,0.358611026963382,0.665320713092027,0.569822880276821,0,0,0.269475606319761,0,0,0.813792356631477,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.873765488520689,1.05506791291381,0.247532705920093,0.331397375727916,0,1.20538905604795,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,2.71085326900425,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0.50133791063589,0,0,0.486634870302636,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0.860234595106124,0,0,0.419499436209906,0.550236083880135,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0.151357427644931,0.576175924479999,0.468642863667593,0.312160076830321,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0.193260853163297,0.272746120590835,0,1.58565817968474,2.65059536642971,2.09149097165133,0.932949495138334,2.01856680700503,2.91981887260664,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.343135620597051,0.768251997860379,1.1240175325762,0.201057944823262,0.462942225792648,0,0,0,0,0.352226082707465,0,0.925971025153221,0.190254152234598,3.95102198979638,0.858486162094873,0,0,0,0,0.16798212819886,0.283550194484773,0.358234090811393,0.871901815541886,1.15014803749563,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0.763976851116555,0,0,0.102827492703324,0.600686115687835,0.571652865261156,0.224262168690721,0.43596006883328,0.36669142910475,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0.207970861530807,0.356857977594324,0.315404830067869,0,0,0,0,0,0,0,0.391602314925481,0,0,0,0,0.303127571446259,3.32870879020994,2.72151263996712,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.725156697549733,0.40101294060657,0.368323955743585,0,0,0.131124414959424,0,0.385076685522074,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0.215915916102139,1.54227252690289,0,1.00337954770971,0.509752546090077,0,0.223874754722178,0,0,0,0.328014645699706,0,0.309123034943167,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.307007349452259,0,0,0.145016693914229,0,0.356128142586949,0.495854746082934,0.576570202095319,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.429374660225974,0,0,0,0,0,0.636406495851874,0.78494864019923,0,0,0.353437207037059,0,0,0.421258456238981,0.48763373908959,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.384888450902048,0,1.08890984861323,0.0941438007767792,0.43050537267123,1.68471475667626,2.66058092122005,0,0,0,0,0,0,0,0,0,1.70918513803957,0,0.980160863924127,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0.748562161632879,0.146508179271894,1.57768678274367,0,1.13654458722565,0.23874448473769,0.593929361665277,0.307160702099232,0,0.140669416410513,0,0,1.05562704063997,0.19924798825107,0,0.251932747854276,0.102268682502155,0,0,0.449341755736634,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,1.04171104434093,1.66173999992772,0,0.455173793141999,0.508507300585533,0.472775363535873,1.03423011972439,5.24888304089858,0.347249989866585,0.885741385813839,0,0,0.221158519862449,0.886642856860642,0.219385397153973,0.10893846351899,0.41827123283581,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.217294743844016,0,0.0915975934018623,0,0,0.470940769185074,0,0.225595660617181,0.588187602953219,0.503464760927528,0.37950746544837,0,0.632994193584081,0,0.706765357169704,0.216388639742091,6.96683351754953,0.619202951523374,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0,2.41981432097328,1.53036380815245,0,3.45743864653333,0.518440956986236,0,0,0,0,0,0.277349346026277,0.347119476670262,0,0.609414446062818,0,0.51595809741485,0.19351266257817,0.65780385377567,0.246346371159628,0.193978032976839,0.353024506766001,0.451961481561065,0,0.397429223405979,0.189932387867636,0,0.400794101257669,0.213452994739353,1.19885765749278,0.144090417154106,0.80175617316141,0.343189995723929,0.288109595976299,0.248505071130865,0.235694034616795,0.135904206073614,0,0.509991088181609,0.288950589901519,0,0,0,0,0,0,0,0,0.399358000997982,0,0.223171457441873,0.134366944973453,0,0,0.157566364614447,0,0.13480708770837,0.0984274815147488,0,0,0,3.05430982083536,3.16340704173638,3.32352270423348,0,1.5476039091159,0.121499113316049,3.01891218839339,0.157611414598396,0.314727528809989,0.105600336519406,0.717149357331379,0.767660789277781,0,0.662091970365432,1.017074150619,0,0.864221491201268,0,1.19730191562487,0.246277562248017,0.170388021785422,0.226624183040251,0.146552233678082,1.32506888912221,0.258565912723101,0.26446520348538,0.513260513652988,0.704815022316672,0.854299300541557,0,0,0,0,0,0,0,0.2506898940227,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0.124192805882767,0.415045904808692,0.124980407962107,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0.151230923763239,0.15543720058278,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0.343395705182793,0,0,0.192619830407303,0,1.04397716786085,0,0.463044948647668,0,0.179088841081487,0,0,0.530067437837643,0.192914038270915,0,0.256241518587947,1.38172136692479,0,0,0.389720617678777,0,0,0.327609848846413,0.245772908753719,0.211312123358627,0,0.320075189082423,0,0.567515953566836,0,0.139879507719444,2.48830904013189,0,0,0.629063767423586,0.327628914576042,0.678930119816101,0.212574920101683,0.743614585554013,0,0,0.23658523500376,0,0,0,0.128458450192919,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0.161475645631851,0,0.196295437002051,0.589848616738702,0,0.346576998451015,0,0,0.397832444232549,0.0752103283492573,0.40341013740704,0,0.261906694481422,0.49131575253029,0,0.202612753855184,0,0.620060389503552,0,1.09394961803644,0.548257766857182,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0.0679697329768317,0.131545547125698,0.236387681767936,2.44709084162552,0.627944742804112,0,0.280272163313789,1.82631744101899,0.863710364874486,0.47775168788705,0,0.158013611732727,1.62737995515375,0.173858272302579,0,0.828864656652147,0.3414369541879,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0.196300467230486,0.487671699929078,0,0,0,0,0.935757853848423,1.19370465096821,0.237840181555137,0.11294608203896,0.329821550236287,0.452888530700021,0.308696632431779,0,0,0,0.707029641304878,0,0,0.4226557275834,0,0,0,0,0,0,0.401206833445841,0,0,0,1.10440093535229,0.271965960763659,2.18175345170189,0,0,0,0,1.64016352285603,0,1.64708051314868,0,1.06886962106224,0.459474497674225,1.0028301571695,0.151557396436479,0,0,0,0,0.23806443146374,0.0645889098360061,0,0.224263725161227,0.12729431655633,0,0,0.342233301085281,0.134704106029175,0.358611026963382,0.665320713092027,0.569822880276821,0,0,0.269475606319761,0,0,0.813792356631477,0.665756774185513,0.201273793591026,0 | ||
|short_description=p10@PPFIA3 | |short_description=p10@PPFIA3 | ||
}} | }} |
Latest revision as of 06:24, 19 September 2015
Short description: | p10@PPFIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_PPFIA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -379bp_to_AK001525_5end |
EntrezGene: | PPFIA3 |
HGNC: | 9247 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.82e-13 | 5 |
epithelial cell | 8.69e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.21e-09 | 4 |
breast cancer | 3.21e-09 | 4 |