FFCP PHASE1:Hg19::chr19:53758167..53758190,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=342926 | |EntrezGene=342926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28730 | |HGNC=28730 | ||
|TSSclassifier=strong | |||
|UniProt=Q86XU0 | |UniProt=Q86XU0 | ||
|association_with_transcript=-41bp_to_ENST00000333952_5end | |association_with_transcript=-41bp_to_ENST00000333952_5end | ||
|cluster_id=chr19:53758167..53758190,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_ZNF677_5end | |description=CAGE_peak_3_at_ZNF677_5end | ||
|id=chr19:53758167..53758190,- | |id=chr19:53758167..53758190,- | ||
|ontology_enrichment_celltype=CL:0000055!2.67e-07!180 | |ontology_enrichment_celltype=CL:0000055!2.67e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000346;3.16e-14;3!CL:1000428;3.16e-14;3!CL:0002559;6.69e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.26e-14,3;CL:1000428,2.26e-14,3;CL:0002559,5.49e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.66e-16;10!UBERON:0005564;1.66e-16;10!UBERON:0010227;2.67e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!3.96e-07!173;UBERON:0006601!3.96e-07!173;UBERON:0002346!4.19e-07!90;UBERON:0000475!8.16e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.47e-20;8!UBERON:0003135;4.99e-15;11!UBERON:0000412;3.16e-14;3!UBERON:0001992;3.16e-14;3!UBERON:0002079;2.67e-11;1!UBERON:0002073;6.69e-09;5!UBERON:0000991;5.83e-08;21!UBERON:0003101;1.32e-07;22!UBERON:0000079;1.32e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.33e-20,8;UBERON:0003135,4.66e-15,11;UBERON:0000412,2.26e-14,3;UBERON:0001992,2.26e-14,3;UBERON:0002079,1.60e-11,1;UBERON:0002073,5.49e-09,5;UBERON:0005086,5.49e-09,5;UBERON:0000991,5.63e-08,21;UBERON:0009196,5.63e-08,21;UBERON:0009117,5.63e-08,21;UBERON:0005564,5.63e-08,21;UBERON:0004176,1.28e-07,22;UBERON:0003101,1.28e-07,22;UBERON:0000079,1.28e-07,22 | |||
|phase1_expression=0,0,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0,0,0.61560529038394,0.204000691244253,0,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0.293600439334847,1.10799081706375,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.661743720148475,0.443458794925128,0.702678285545008,5.43563163315507,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0.735326160691737,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.397227542439656,0.573673241497627,0,0,1.06748995729705,0,0.311211035399766,0,0,0,1.15235184896,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0.280901613404497,0,0.368502951935304,0.309977343527296,1.18800285728205,0,0,0,0.505008341862199,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0,0.558350568994769,0.168776332241266,0.487185025805993,0,0.0920498986422993,0.646584227275248,0.355009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0.927708378250397,0.348581828608555,0.207322110030741,0.252320850875628,1.09493207722749,0,1.28648187638577,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0.977424915930974,0,1.44331342025273,0,0.234817388471643,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0.102827492703324,0.300343057843917,0,0.448524337381443,0.43596006883328,0.22001485746285,0.517086863031111,0,0,0.26593811658487,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0.670065061337395,0,0,0,0,0.24538298343828,1.00034104211935,0.813795071099207,0.207970861530807,0.178428988797162,0,0.468565659970853,0.601892199455438,0,0,0,0,0.60818530127658,0.195801157462741,0,0,0,0,0,0,0,0,0.460385919864187,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0.232420756919918,0,0.601519410909855,0.184161977871793,0.229628896329213,0,0,0,0.462092022626489,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0,0.457847324091717,0.495056999523528,0,0,0,0.290012154876366,0.462145851343933,0.460511024178389,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0.6970372701606,0,0,0,0.55597265731176,0.286249773483982,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0,0,0.539617372749944,0,0.353437207037059,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0.143411352204052,0.294747123039363,0.35667105148125,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0.846694330895531,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,1.23087398947712,0.270455678475983,0.33307196799782,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0.333926115068718,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0,0.569710279235006,0.23056390438806,0.448788222048861,0.217294743844016,0.638002319463839,0.183195186803725,0,0,0,0.498635045700469,0,0,0.167821586975843,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0.126373159256976,0.450970258243478,0.518440956986236,0.664653872707185,0,0,0,0.853828638089378,0,0.347119476670262,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0.264768380074501,0,0,0,0.316553979779393,0.586654148204409,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0.962776056180637,0.415440338029185,0.674921674654501,1.5476039091159,0.121499113316049,0,0.394028536495991,0.681909645754975,0.105600336519406,0,0,1.42939065274673,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.129282956361551,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.124192805882767,0,0.249960815924213,0,0,0,0,0,0,0,0.554805861502613,0,0.50313580350515,0,0,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0.829412415681711,0,0,0,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0,0,0.57785949122191,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0.323474434190045,0.471797825567689,0.218419276384028,0,0.637724760305049,0.495743057036009,0,0.318004350653419,0,0,0.352675943690684,0,0.385375350578757,0,0,0.205116364240755,0.756215088665154,0.138314504928436,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0.300841313397029,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.126831620387814,1.64092442705466,0.548257766857182,0,0.175871244359621,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.135939465953663,0.263091094251396,0.118193840883968,0.444925607568277,0.078493092850514,0.314231179832004,0,0.913158720509496,0,0.47775168788705,0.0714765441766563,0.158013611732727,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0.219881033490858,0.452888530700021,0,0,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,1.30905207102113,0,0,0.462175628631418,0,0.630832124175395,0.109265571963696,0.253397002022874,0.101988829741982,0.26721740526556,1.28652859348783,1.25353769646188,7.57786982182394,16.6137760696831,0,0.413731983447581,0.213233981900981,0,0.0645889098360061,0.124149428591716,0.112131862580613,0.12729431655633,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0.263766978228454,0,0,0.672325146451775,0.602694528023977,0,0,0.61560529038394,0.204000691244253,0,0.286235987131057,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0.919421224478927,0,0,0,0,0.293600439334847,1.10799081706375,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0.579386075843295,0,0,0.661743720148475,0.443458794925128,0.702678285545008,5.43563163315507,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0.402829317109147,0,0,0.735326160691737,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.397227542439656,0.573673241497627,0,0,1.06748995729705,0,0.311211035399766,0,0,0,1.15235184896,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0,0.280901613404497,0,0.368502951935304,0.309977343527296,1.18800285728205,0,0,0,0.505008341862199,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0,0.558350568994769,0.168776332241266,0.487185025805993,0,0.0920498986422993,0.646584227275248,0.355009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0.927708378250397,0.348581828608555,0.207322110030741,0.252320850875628,1.09493207722749,0,1.28648187638577,1.38134921352481,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0.977424915930974,0,1.44331342025273,0,0.234817388471643,0.288732895522148,0.462985512576611,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0.25248486685276,0,0,0,0,0.102827492703324,0.300343057843917,0,0.448524337381443,0.43596006883328,0.22001485746285,0.517086863031111,0,0,0.26593811658487,0,0.514414748524284,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0.579125226670317,0,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0.670065061337395,0,0,0,0,0.24538298343828,1.00034104211935,0.813795071099207,0.207970861530807,0.178428988797162,0,0.468565659970853,0.601892199455438,0,0,0,0,0.60818530127658,0.195801157462741,0,0,0,0,0,0,0,0,0.460385919864187,0,0.256278298511402,0.511707249066704,0.321707842287215,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0.232420756919918,0,0.601519410909855,0.184161977871793,0.229628896329213,0,0,0,0.462092022626489,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0.650756789328606,0,0.457847324091717,0.495056999523528,0,0,0,0.290012154876366,0.462145851343933,0.460511024178389,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.382838137483752,0.10115778085555,0,0,0.6970372701606,0,0,0,0.55597265731176,0.286249773483982,0.372158369359667,0,0.38126038784765,0.255897791311334,0,0,0,0.539617372749944,0,0.353437207037059,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0.143411352204052,0.294747123039363,0.35667105148125,0.354761064070598,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0.191505370132367,0.846694330895531,0,0,0.228234679033192,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,1.23087398947712,0.270455678475983,0.33307196799782,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0.333926115068718,0,0,0.19924798825107,0,0,0.102268682502155,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0,0,0.569710279235006,0.23056390438806,0.448788222048861,0.217294743844016,0.638002319463839,0.183195186803725,0,0,0,0.498635045700469,0,0,0.167821586975843,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0.61214552326098,0.126373159256976,0.450970258243478,0.518440956986236,0.664653872707185,0,0,0,0.853828638089378,0,0.347119476670262,0,0,0.17472666824203,0.171986032471617,0,0,0,0.0969890164884194,0.264768380074501,0,0,0,0.316553979779393,0.586654148204409,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0.577901179803038,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0.199679000498991,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0.962776056180637,0.415440338029185,0.674921674654501,1.5476039091159,0.121499113316049,0,0.394028536495991,0.681909645754975,0.105600336519406,0,0,1.42939065274673,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.129282956361551,0.39669780522807,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0.124192805882767,0,0.249960815924213,0,0,0,0,0,0,0,0.554805861502613,0,0.50313580350515,0,0,0,0.15543720058278,0,0.159296767163702,0,0.155262956876259,0.829412415681711,0,0,0,0,0,0,0.107410557042488,0,0,0,0.686791410365586,0,0,0.57785949122191,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0.323474434190045,0.471797825567689,0.218419276384028,0,0.637724760305049,0.495743057036009,0,0.318004350653419,0,0,0.352675943690684,0,0.385375350578757,0,0,0.205116364240755,0.756215088665154,0.138314504928436,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0.596748666348824,0.300841313397029,0.20170506870352,0,0,0.163771917510097,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.126831620387814,1.64092442705466,0.548257766857182,0,0.175871244359621,0,0,0,0,0.455324382702595,0.0887023701626388,0,0,0.135939465953663,0.263091094251396,0.118193840883968,0.444925607568277,0.078493092850514,0.314231179832004,0,0.913158720509496,0,0.47775168788705,0.0714765441766563,0.158013611732727,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0.485710993059139,0,0,0.118920090777569,0,0.219881033490858,0.452888530700021,0,0,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0.257831551894309,0,0,0,0,0,0,0,0,0,1.30905207102113,0,0,0.462175628631418,0,0.630832124175395,0.109265571963696,0.253397002022874,0.101988829741982,0.26721740526556,1.28652859348783,1.25353769646188,7.57786982182394,16.6137760696831,0,0.413731983447581,0.213233981900981,0,0.0645889098360061,0.124149428591716,0.112131862580613,0.12729431655633,0,0,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p3@ZNF677 | |short_description=p3@ZNF677 | ||
}} | }} |
Latest revision as of 18:38, 19 September 2015
Short description: | p3@ZNF677 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNF677_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -41bp_to_ENST00000333952_5end |
EntrezGene: | ZNF677 |
HGNC: | 28730 |
UniProt: | Q86XU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.26e-14 | 3 |
stem cell of epidermis | 2.26e-14 | 3 |
hair follicle cell | 5.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.33e-20 | 8 |
male reproductive organ | 4.66e-15 | 11 |
dermal papilla | 2.26e-14 | 3 |
papillary layer of dermis | 2.26e-14 | 3 |
left cardiac atrium | 1.60e-11 | 1 |
hair follicle | 5.49e-09 | 5 |
hair follicle placode | 5.49e-09 | 5 |
gonad | 5.63e-08 | 21 |
indifferent external genitalia | 5.63e-08 | 21 |
indifferent gonad | 5.63e-08 | 21 |
gonad primordium | 5.63e-08 | 21 |
external genitalia | 1.28e-07 | 22 |
male organism | 1.28e-07 | 22 |
male reproductive system | 1.28e-07 | 22 |