FFCP PHASE1:Hg19::chr19:54290483..54290487,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=442916 | |EntrezGene=442916 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=31785 | |HGNC=31785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-441bp_to_NR_029864,uc010yec.1_5end | |association_with_transcript=-441bp_to_NR_029864,uc010yec.1_5end | ||
|cluster_id=chr19:54290483..54290487,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_1_at_MIR371A_5end | |description=CAGE_peak_1_at_MIR371A_5end | ||
|id=chr19:54290483..54290487,+ | |id=chr19:54290483..54290487,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.92e-38!5;CL:0000039!6.60e-28!7;CL:0000586!6.60e-28!7;CL:0000047!1.18e-15!8;CL:0000540!4.61e-12!6;CL:0000031!4.61e-12!6;CL:0000404!4.61e-12!6;CL:0002563!6.48e-09!4;CL:0000148!1.68e-07!10;CL:0000541!1.68e-07!10 | |ontology_enrichment_celltype=CL:0002322!2.92e-38!5;CL:0000039!6.60e-28!7;CL:0000586!6.60e-28!7;CL:0000047!1.18e-15!8;CL:0000540!4.61e-12!6;CL:0000031!4.61e-12!6;CL:0000404!4.61e-12!6;CL:0002563!6.48e-09!4;CL:0000148!1.68e-07!10;CL:0000541!1.68e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.82e-24;7!CL:0000586;3.82e-24;7!CL:0002563;4.92e-19;4!CL:0002322;2.90e-15;5!CL:0002253;1.72e-10;2!CL:0000047;2.85e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.83e-24,7;CL:0000586,3.83e-24,7;CL:0002563,5.64e-19,4;CL:0002322,2.90e-15,5;CL:0002253,1.72e-10,2;CL:0000047,6.63e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.00e-17;10!UBERON:0005564;4.00e-17;10 | |||
|ontology_enrichment_disease=DOID:1799!7.27e-09!1;DOID:10165!7.27e-09!1;DOID:1798!7.27e-09!1;DOID:3095!8.87e-09!22;DOID:2994!8.87e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.03e-08;22!DOID:2994;4.03e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.03e-08,22;DOID:2994,4.03e-08,22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.19e-21;8!UBERON:0001242;4.92e-19;4!UBERON:0001262;4.92e-19;4!UBERON:0004786;4.92e-19;4!UBERON:0004808;4.92e-19;4!UBERON:0001277;4.92e-19;4!UBERON:0003135;1.25e-15;11!UBERON:0000485;2.62e-11;7!UBERON:0003929;2.62e-11;7!UBERON:0003350;5.18e-10;8!UBERON:0000991;1.76e-08;21!UBERON:0003101;4.03e-08;22!UBERON:0000079;4.03e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.20e-21,8;UBERON:0001242,5.64e-19,4;UBERON:0001262,5.64e-19,4;UBERON:0004786,5.64e-19,4;UBERON:0004808,5.64e-19,4;UBERON:0001277,5.64e-19,4;UBERON:0003135,1.25e-15,11;UBERON:0003350,5.54e-10,8;UBERON:0000485,5.64e-09,9;UBERON:0000991,1.76e-08,21;UBERON:0009196,1.76e-08,21;UBERON:0009117,1.76e-08,21;UBERON:0005564,1.76e-08,21;UBERON:0004176,4.03e-08,22;UBERON:0003101,4.03e-08,22;UBERON:0000079,4.03e-08,22 | |||
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|short_description=p1@MIR371A | |short_description=p1@MIR371A | ||
}} | }} |
Latest revision as of 19:39, 19 September 2015
Short description: | p1@MIR371A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR371A_5end |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | -441bp_to_NR_029864, uc010yec.1_5end |
EntrezGene: | MIR371A |
HGNC: | 31785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.83e-24 | 7 |
germ cell | 3.83e-24 | 7 |
intestinal epithelial cell | 5.64e-19 | 4 |
embryonic stem cell | 2.90e-15 | 5 |
epithelial cell of large intestine | 1.72e-10 | 2 |
neuronal stem cell | 6.63e-10 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 3.20e-21 | 8 |
intestinal mucosa | 5.64e-19 | 4 |
wall of intestine | 5.64e-19 | 4 |
gastrointestinal system mucosa | 5.64e-19 | 4 |
gastrointestinal system epithelium | 5.64e-19 | 4 |
intestinal epithelium | 5.64e-19 | 4 |
male reproductive organ | 1.25e-15 | 11 |
epithelium of mucosa | 5.54e-10 | 8 |
simple columnar epithelium | 5.64e-09 | 9 |
gonad | 1.76e-08 | 21 |
indifferent external genitalia | 1.76e-08 | 21 |
indifferent gonad | 1.76e-08 | 21 |
gonad primordium | 1.76e-08 | 21 |
external genitalia | 4.03e-08 | 22 |
male organism | 4.03e-08 | 22 |
male reproductive system | 4.03e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.03e-08 | 22 |
germ cell cancer | 4.03e-08 | 22 |