FFCP PHASE1:Hg19::chr19:57946977..57947008,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:57946977..57947008,+ | |||
|description=CAGE_peak_at_chr19:57946977..57947008,+ | |description=CAGE_peak_at_chr19:57946977..57947008,+ | ||
|id=chr19:57946977..57947008,+ | |id=chr19:57946977..57947008,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.97e-13!254;CL:0002077!1.13e-09!33;CL:0002076!3.18e-07!43;CL:0000710!6.25e-07!20 | |ontology_enrichment_celltype=CL:0000066!2.97e-13!254;CL:0002077!1.13e-09!33;CL:0002076!3.18e-07!43;CL:0000710!6.25e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0002077;5.57e-14;34!CL:0002159;1.79e-10;14!CL:0000244;1.88e-10;4!CL:0000731;1.88e-10;4!CL:0002076;5.18e-09;42!CL:0000622;6.66e-08;5!CL:0002368;1.22e-07;13!CL:0000150;1.25e-07;9!CL:0002166;5.65e-07;3!CL:0000710;6.58e-07;20!CL:0000148;7.21e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002077,2.39e-15,34;CL:0000066,2.36e-13,253;CL:0002076,9.03e-12,42;CL:0002159,1.14e-10,14;CL:0000244,1.84e-10,4;CL:0000731,1.84e-10,4;CL:0002321,1.38e-09,250;CL:0000223,7.61e-08,58;CL:0000622,7.66e-08,5;CL:0002368,1.27e-07,13;CL:0000150,1.42e-07,9;CL:0002166,4.99e-07,3;CL:0000148,7.03e-07,10;CL:0000541,7.03e-07,10;CL:0000710,7.74e-07,20;CL:0002621,8.60e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.81e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!2.70e-08!129;UBERON:0007811!2.70e-08!129;UBERON:0000033!1.48e-07!123;UBERON:0000475!2.38e-07!365;UBERON:0000481!3.40e-07!347;UBERON:0001869!6.24e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.90e-12;12!UBERON:0001708;1.88e-10;4!UBERON:0008895;1.88e-10;4!UBERON:0001873;3.81e-09;2!UBERON:0011159;1.93e-08;5!UBERON:0000365;1.93e-08;5!UBERON:0005910;4.27e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001708,2.60e-10,4;UBERON:0008895,2.60e-10,4;UBERON:0001873,3.25e-09,2;UBERON:0010122,3.25e-09,2;UBERON:0000365,1.89e-08,5;UBERON:0011159,2.49e-08,5;UBERON:0005910,4.21e-07,6;UBERON:0010188,5.28e-07,6;UBERON:0002539,5.28e-07,6;UBERON:0008816,5.28e-07,6;UBERON:0001949,8.60e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0.631719873426831,0,0.982935746006035,3.48900583986214,0.873765488520689,1.05506791291381,0.37129905888014,0.662794751455832,1.34465029290355,0,0.730310090387373,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.157421562627358,0,0,0,1.83884244895785,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0.260118695119756,0.328875809207352,0.276350017785848,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.189069634328136,1.10864698731282,0.43917392846563,0.196468613246569,0.364295288292542,1.48313777113772,0,0,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0.949265659568129,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,1.2333377420858,0,0.134710672069688,0,0,0,0.234321431833797,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0,0,0,0,0,0.201504196455281,0.339121184620975,1.93260853163297,1.90922284413584,0.860413786167011,0.243947412259191,0,0.116193942869518,0.414644220061482,0,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0,0.245976877086227,0.686271241194102,1.75600456653801,2.24803506515239,0.301586917234893,0.740707561268237,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0.246217006087397,0,0.148631162288728,2.81201501960331,3.69560682037491,0.850650583454319,0.358234090811393,0.290633938513962,0,0,0.176096868026452,0.621984346622316,0.144119953416961,0.25248486685276,1.71444314588856,0.381988425558278,1.17217447210047,0,0.616964956219941,1.50171528921959,3.14409075893636,0,0,0,0.387815147273333,0,0,0,0,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0.301439377059586,0,1.19967589418468,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0.892144943985809,0.315404830067869,0.234282829985426,0,0,0,0,0,0.260650843404249,0.587403472388222,0,0,0,0,0.909382714338778,0,0,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.532685175939381,0,0.519254429183621,0,0,2.6065841139427,0.460404944679482,0,0,0.131124414959424,0.902399225814824,0.539107359730903,0.784349769176855,0,0,0,0.340187410553031,0,1.54227252690289,0.812839312631559,1.00337954770971,0.764628819135115,0,1.56712328305525,0,0,0,0.656029291399411,0,0.309123034943167,0.0915694648183434,0,1.72279661398852,0,0,0,0.154048617114644,0,0,0.322260734604821,0,0,0,0.661139661443912,1.34533047155574,1.40373983744043,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0.858749320451947,0.372158369359667,0,0,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.845086807596724,0,0.0982490410131212,1.07001315444375,0,0,0,0.379473173765715,0,1.34710957815717,0,0,0.0941438007767792,3.44404298136984,0,2.66058092122005,1.37834040124176,0,0,0,0,0,0,0,0,0.427296284509893,0,0,0,0,0,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0,0.228234679033192,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0.95497793895076,0.296964680832639,2.15012491469462,0,0.140669416410513,0.111308705022906,0.16480387422676,0.844501632511974,0.19924798825107,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,0,0,0.278304294485554,0,0,0.349839999984783,0,0.227586896570999,1.01701460117107,0.709163045303809,0,0,0,1.77148277162768,1.20596438625408,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0,0,0.421996129056054,0,0.141353071433941,0,0.995261931078505,0.619202951523374,1.22206028986725,0,0,0,0.134802265961354,0,1.87411556580271,0.182454789215666,0,0.485560759068186,1.18375320854817,0,0,0,0.450970258243478,0.103688191397247,0,0,0,0,0.284609546029793,0,2.77695581336209,0.391969589657511,0,0.52418000472609,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0.633107959558787,0.391102765469606,0,0,0.19980960958213,0,0.229073192331831,0,0,0,0,0.407712618220842,0.836822770498666,0,0,0.600420288709789,0.410716136675979,0,0,0.788662062837943,0,0,0,0.199679000498991,0,0,0,0,0,0.157566364614447,0.412079291905832,0.0674035438541849,0,0.0846733320657845,0,0.953423842781029,0.321506296930038,0.412618309791701,0,0.2249738915515,0,0.789744236554321,0,0.472834243795189,0.472091293214983,0.105600336519406,0.179287339332845,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0.340776043570843,0,0.293104467356165,0,0.258565912723101,0.13223260174269,0,0.704815022316672,0.3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| ||
|short_description=p@chr19:57946977..57947008,+ | |short_description=p@chr19:57946977..57947008,+ | ||
}} | }} |
Latest revision as of 17:47, 27 July 2015
Short description: | p@chr19:57946977..57947008, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:57946977..57947008, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelial cell | 2.39e-15 | 34 |
epithelial cell | 2.36e-13 | 253 |
endo-epithelial cell | 9.03e-12 | 42 |
general ecto-epithelial cell | 1.14e-10 | 14 |
transitional epithelial cell | 1.84e-10 | 4 |
urothelial cell | 1.84e-10 | 4 |
embryonic cell | 1.38e-09 | 250 |
endodermal cell | 7.61e-08 | 58 |
acinar cell | 7.66e-08 | 5 |
respiratory epithelial cell | 1.27e-07 | 13 |
glandular epithelial cell | 1.42e-07 | 9 |
epithelial cell of Malassez | 4.99e-07 | 3 |
melanocyte | 7.03e-07 | 10 |
melanoblast | 7.03e-07 | 10 |
neurecto-epithelial cell | 7.74e-07 | 20 |
gingival epithelial cell | 8.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
jaw skeleton | 2.60e-10 | 4 |
splanchnocranium | 2.60e-10 | 4 |
caudate nucleus | 3.25e-09 | 2 |
future caudate nucleus | 3.25e-09 | 2 |
urothelium | 1.89e-08 | 5 |
primary subdivision of cranial skeletal system | 2.49e-08 | 5 |
transitional epithelium | 4.21e-07 | 6 |
protuberance | 5.28e-07 | 6 |
pharyngeal arch | 5.28e-07 | 6 |
embryonic head | 5.28e-07 | 6 |
gingival epithelium | 8.60e-07 | 3 |