FFCP PHASE1:Hg19::chr19:6681345..6681352,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:6681345..6681352,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:6681345..6681352,- | |description=CAGE_peak_at_chr19:6681345..6681352,- | ||
|id=chr19:6681345..6681352,- | |id=chr19:6681345..6681352,- | ||
|ontology_enrichment_celltype=CL:0000181!1.81e-10!12;CL:0000417!1.81e-10!12;CL:0000668!1.81e-10!12;CL:0000414!1.81e-10!12;CL:0000412!1.81e-10!12;CL:0000182!1.81e-10!12 | |ontology_enrichment_celltype=CL:0000181!1.81e-10!12;CL:0000417!1.81e-10!12;CL:0000668!1.81e-10!12;CL:0000414!1.81e-10!12;CL:0000412!1.81e-10!12;CL:0000182!1.81e-10!12 | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.73e-29;1!CL:0002625;2.73e-29;1!CL:0000216;2.73e-29;1!CL:0000182;4.42e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,2.37e-29,1;CL:0002625,2.37e-29,1;CL:0000216,2.37e-29,1;CL:0000182,4.42e-22,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.98e-11!115;UBERON:0002107!2.13e-09!19;UBERON:0006925!2.13e-09!19;UBERON:0008836!2.13e-09!19;UBERON:0001049!9.69e-09!57;UBERON:0005068!9.69e-09!57;UBERON:0006241!9.69e-09!57;UBERON:0007135!9.69e-09!57;UBERON:0009497!7.51e-08!25;UBERON:0000015!7.51e-08!25;UBERON:0002423!7.51e-08!25;UBERON:0006235!7.51e-08!25;UBERON:0004161!7.51e-08!25;UBERON:0008835!8.44e-08!22;UBERON:0003894!8.44e-08!22;UBERON:0002240!1.84e-07!3;UBERON:0005057!1.97e-07!26;UBERON:0009854!2.31e-07!23;UBERON:0005174!4.68e-07!5;UBERON:0001137!4.68e-07!5;UBERON:0002365!4.97e-07!31;UBERON:0002330!4.97e-07!31;UBERON:0003075!6.55e-07!86;UBERON:0007284!6.55e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.73e-29;1!UBERON:0001343;2.73e-29;1!UBERON:0004910;2.73e-29;1!UBERON:0004813;2.73e-29;1!UBERON:0002107;2.24e-24;19!UBERON:0006925;2.24e-24;19!UBERON:0002423;1.11e-18;25!UBERON:0002365;1.15e-15;31!UBERON:0002330;1.15e-15;31!UBERON:0004909;2.21e-15;2!UBERON:0002368;1.17e-12;33!UBERON:0000949;1.21e-10;43!UBERON:0005904;2.35e-08;4!UBERON:0005172;6.94e-08;52!UBERON:0005173;6.94e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,2.37e-29,1;UBERON:0001343,2.37e-29,1;UBERON:0004910,2.37e-29,1;UBERON:0005154,2.37e-29,1;UBERON:0005295,2.37e-29,1;UBERON:0004813,2.37e-29,1;UBERON:0005297,2.37e-29,1;UBERON:0005294,2.37e-29,1;UBERON:0010141,2.37e-29,1;UBERON:0005891,2.37e-29,1;UBERON:0002107,2.45e-24,19;UBERON:0006925,2.45e-24,19;UBERON:0008836,2.45e-24,19;UBERON:0008835,4.16e-21,22;UBERON:0003894,4.16e-21,22;UBERON:0009854,3.23e-20,23;UBERON:0007499,1.19e-18,25;UBERON:0009497,1.19e-18,25;UBERON:0000015,1.19e-18,25;UBERON:0002423,1.19e-18,25;UBERON:0006235,1.19e-18,25;UBERON:0004161,1.19e-18,25;UBERON:0009856,5.90e-18,26;UBERON:0004909,2.05e-15,2;UBERON:0002365,3.74e-15,31;UBERON:0002330,3.74e-15,31;UBERON:0002368,1.75e-13,35;UBERON:0000949,1.34e-10,45;UBERON:0003929,6.55e-09,54;UBERON:0005172,6.55e-09,54;UBERON:0005173,6.55e-09,54;UBERON:0005904,2.26e-08,4;UBERON:0002530,3.43e-08,59;UBERON:0002417,4.62e-08,60;UBERON:0000916,4.62e-08,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0,0.256160706529101,0.47296445977717,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0.199463657621632,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,10.1404027857465,4.91413608338813,2.95394953340702,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,1.6068392984416,0,0,0,0,0.214840489736547,0,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.104421949505455,0.269604531922708,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.0730893170861856,0,0.193978032976839,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.547621515567972,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0.472699093843342,0.906574442192831,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,1.02586563574658,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0.919036730290385,0,0,0,0,0.500763722825999,0,0.665574309221114,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,0,0.449803112163605,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.126831620387814,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0.203909198930495,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.594092800654172,0.4226557275834,0,0,0,0,0.178553938605658,0,0,0,0,0.716697915757256,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.413731983447581,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p@chr19:6681345..6681352,- | |short_description=p@chr19:6681345..6681352,- | ||
}} | }} |
Latest revision as of 18:15, 27 July 2015
Short description: | p@chr19:6681345..6681352, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6681345..6681352, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 2.37e-29 | 1 |
seminiferous tubule epithelial cell | 2.37e-29 | 1 |
Sertoli cell | 2.37e-29 | 1 |
hepatocyte | 4.42e-22 | 12 |