FFCP PHASE1:Hg19::chr11:2018321..2018332,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2018321..2018332,-
|short_description=p22@H19
|description=CAGE_peak_22_at_H19_5end
|association_with_transcript=-66bp_to_ENST00000417089_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-66bp_to_ENST00000417089_5end | |||
|cluster_id=chr11:2018321..2018332,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_22_at_H19_5end | |||
|id=chr11:2018321..2018332,- | |||
|ontology_enrichment_celltype=CL:0000188!9.42e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.80e-18;19!CL:0002577;4.23e-09;3!CL:0002541;7.10e-09;3!CL:0000680;1.02e-07;7!CL:0000515;2.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.84e-18,19;CL:0002577,4.13e-09,3;CL:0002541,7.69e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.83e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.79e-14!14;UBERON:0000158!2.79e-14!14;UBERON:0001737!2.50e-12!9;UBERON:0001557!2.82e-11!19;UBERON:0000478!5.39e-11!24;UBERON:0003124!1.17e-10!7;UBERON:0004923!2.41e-09!57;UBERON:0003104!2.38e-07!238;UBERON:0009142!2.38e-07!238;UBERON:0003688!4.50e-07!6;UBERON:0002358!4.50e-07!6;UBERON:0003684!4.50e-07!6;UBERON:0001178!4.50e-07!6;UBERON:0001987!9.09e-07!4;UBERON:0004340!9.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.53e-21;9!UBERON:0001557;2.53e-21;9!UBERON:0000478;5.87e-19;24!UBERON:0005631;1.22e-16;10!UBERON:0000158;1.22e-16;10!UBERON:0001134;1.94e-15;16!UBERON:0002036;1.94e-15;16!UBERON:0001987;4.40e-11;4!UBERON:0000305;6.81e-10;7!UBERON:0003124;7.10e-09;3!UBERON:0000920;7.10e-09;3!UBERON:0001723;1.75e-08;3!UBERON:0001033;1.75e-08;3!UBERON:0002385;7.00e-07;31!UBERON:0001015;7.00e-07;31!UBERON:0000383;7.00e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,8.21e-26,14;UBERON:0000158,8.21e-26,14;UBERON:0001737,2.30e-21,9;UBERON:0000478,5.49e-19,24;UBERON:0003124,2.76e-18,7;UBERON:0001557,1.10e-16,19;UBERON:0001987,3.79e-11,4;UBERON:0004340,3.79e-11,4;UBERON:0000305,6.76e-10,7;UBERON:0000920,7.69e-09,3;UBERON:0004871,1.37e-08,8;UBERON:0001723,1.61e-08,3;UBERON:0001033,1.61e-08,3;UBERON:0010056,1.61e-08,3;UBERON:0000072,3.19e-08,47 | |||
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| ||
|short_description=p22@H19 | |||
}} | }} |
Latest revision as of 06:46, 17 September 2015
Short description: | p22@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -66bp_to_ENST00000417089_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.84e-18 | 19 |
placental epithelial cell | 4.13e-09 | 3 |
chorionic membrane mesenchymal stem cell | 7.69e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 8.21e-26 | 14 |
membranous layer | 8.21e-26 | 14 |
larynx | 2.30e-21 | 9 |
extraembryonic structure | 5.49e-19 | 24 |
chorion | 2.76e-18 | 7 |
upper respiratory tract | 1.10e-16 | 19 |
placenta | 3.79e-11 | 4 |
allantois | 3.79e-11 | 4 |
amnion | 6.76e-10 | 7 |
egg chorion | 7.69e-09 | 3 |
somatic layer of lateral plate mesoderm | 1.37e-08 | 8 |
tongue | 1.61e-08 | 3 |
gustatory system | 1.61e-08 | 3 |
future tongue | 1.61e-08 | 3 |
segment of respiratory tract | 3.19e-08 | 47 |