FFCP PHASE1:Hg19::chr11:3078595..3078613,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:3078595..3078613,-
|short_description=p2@CARS
|description=CAGE_peak_2_at_CARS_5end
|association_with_transcript=0bp_to_ENST00000526890_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=833 | |EntrezGene=833 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1493 | |HGNC=1493 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526890_5end | |||
|cluster_id=chr11:3078595..3078613,- | |||
|description=CAGE_peak_2_at_CARS_5end | |||
|id=chr11:3078595..3078613,- | |||
|ontology_enrichment_celltype=CL:0000548!3.69e-30!679;CL:0000004!3.69e-30!679;CL:0000255!3.69e-30!679;CL:0000012!1.28e-29!682;CL:0000144!5.35e-29!625;CL:0002371!1.74e-26!591;CL:0000003!1.44e-24!722;CL:0000048!9.76e-21!430;CL:0000723!7.83e-20!436;CL:0000034!1.33e-19!444;CL:0002320!1.61e-18!365;CL:0000134!8.63e-17!358;CL:0000219!1.77e-15!390;CL:0000063!1.42e-13!578;CL:0000055!3.65e-11!180;CL:0000057!1.37e-10!75;CL:0002057!2.75e-10!42;CL:0000860!2.01e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.78e-14;33!CL:0002057;1.78e-14;33!CL:0000473;2.20e-08;39!CL:0000234;2.20e-08;39!CL:0000576;7.83e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.52e-21,427;CL:0000723,2.03e-20,433;CL:0000034,3.27e-20,441;CL:0002320,7.44e-19,361;CL:0000134,4.15e-17,354;CL:0000219,9.56e-16,386;CL:0000057,9.45e-11,76;CL:0000860,2.58e-10,42;CL:0002057,2.58e-10,42;CL:0000473,3.49e-07,48;CL:0000234,3.49e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;2.11e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.75e-18!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.21e-19,371;UBERON:0002204,6.39e-07,167 | |||
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| ||
|short_description=p2@CARS | |||
}} | }} |
Latest revision as of 14:07, 17 September 2015
Short description: | p2@CARS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CARS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000526890_5end |
EntrezGene: | CARS |
HGNC: | 1493 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.52e-21 | 427 |
somatic stem cell | 2.03e-20 | 433 |
stem cell | 3.27e-20 | 441 |
connective tissue cell | 7.44e-19 | 361 |
mesenchymal cell | 4.15e-17 | 354 |
motile cell | 9.56e-16 | 386 |
fibroblast | 9.45e-11 | 76 |
classical monocyte | 2.58e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.58e-10 | 42 |
defensive cell | 3.49e-07 | 48 |
phagocyte | 3.49e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.21e-19 | 371 |
musculoskeletal system | 6.39e-07 | 167 |