FFCP PHASE1:Hg19::chr15:26874251..26874262,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2562 | |EntrezGene=2562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4083 | |HGNC=4083 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z2W1,P28472 | |UniProt=B7Z2W1,P28472 | ||
|association_with_transcript=-14bp_to_ENST00000400188,NM_001191321_5end | |association_with_transcript=-14bp_to_ENST00000400188,NM_001191321_5end | ||
|cluster_id=chr15:26874251..26874262,- | |||
|description=CAGE_peak_7_at_GABRB3_5end | |description=CAGE_peak_7_at_GABRB3_5end | ||
|id=chr15:26874251..26874262,- | |id=chr15:26874251..26874262,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;9.72e-14;1!CL:0002379;9.72e-14;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.10e-13,1;CL:0002591,1.61e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.50e-14;1!UBERON:0001041;5.84e-07;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3620;9.72e-14;1!DOID:3565;9.72e-14;1!DOID:1324;3.47e-08;15!DOID:0050615;1.05e-07;16!DOID:3910;1.64e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.10e-13,1;DOID:3565,1.10e-13,1;DOID:1324,3.07e-08,15;DOID:0050615,9.36e-08,16;DOID:3910,1.20e-07,2;DOID:305,9.85e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.64e-07;2!UBERON:0000078;1.64e-07;2!UBERON:0002012;1.64e-07;2!UBERON:0008886;1.64e-07;2!UBERON:0002173;1.64e-07;2!UBERON:0002186;1.64e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.20e-07,2;UBERON:0002173,1.20e-07,2;UBERON:0002186,1.20e-07,2;UBERON:0004807,1.88e-07,28;UBERON:0000078,2.12e-07,2;UBERON:0007497,2.12e-07,2;UBERON:0003643,2.12e-07,2;UBERON:0003504,2.12e-07,2;UBERON:0003469,2.12e-07,2;UBERON:0003496,2.12e-07,2;UBERON:0002012,2.12e-07,2;UBERON:0008886,2.12e-07,2;UBERON:0007303,2.12e-07,2;UBERON:0002061,2.12e-07,2;UBERON:0005432,2.12e-07,2;UBERON:0004363,2.12e-07,2 | |||
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| ||
|short_description=p7@GABRB3 | |short_description=p7@GABRB3 | ||
}} | }} |
Latest revision as of 01:31, 17 September 2015
Short description: | p7@GABRB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GABRB3_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000400188, NM_001191321_5end |
EntrezGene: | GABRB3 |
HGNC: | 4083 |
UniProt: | B7Z2W1P28472 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.10e-13 | 1 |
smooth muscle cell of the pulmonary artery | 1.61e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.20e-07 | 2 |
alveolar duct | 1.20e-07 | 2 |
bronchiole | 1.20e-07 | 2 |
respiratory system epithelium | 1.88e-07 | 28 |
mixed ectoderm/mesoderm/endoderm-derived structure | 2.12e-07 | 2 |
developing epithelial placode | 2.12e-07 | 2 |
respiratory system arterial blood vessel | 2.12e-07 | 2 |
respiratory system blood vessel | 2.12e-07 | 2 |
respiratory system artery | 2.12e-07 | 2 |
head blood vessel | 2.12e-07 | 2 |
pulmonary artery | 2.12e-07 | 2 |
pulmonary vascular system | 2.12e-07 | 2 |
pharyngeal vasculature | 2.12e-07 | 2 |
truncus arteriosus | 2.12e-07 | 2 |
aortic sac | 2.12e-07 | 2 |
pharyngeal arch artery | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.10e-13 | 1 |
meningioma | 1.10e-13 | 1 |
lung cancer | 3.07e-08 | 15 |
respiratory system cancer | 9.36e-08 | 16 |
lung adenocarcinoma | 1.20e-07 | 2 |
carcinoma | 9.85e-07 | 106 |