FFCP PHASE1:Hg19::chr15:45950495..45950505,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:45950495..45950505,+ | |||
|coexpression_cluster_id=C86 | |||
|description=CAGE_peak_at_chr15:45950495..45950505,+ | |description=CAGE_peak_at_chr15:45950495..45950505,+ | ||
|id=chr15:45950495..45950505,+ | |id=chr15:45950495..45950505,+ | ||
|ontology_enrichment_celltype=CL:0002253!1.82e-11!2 | |ontology_enrichment_celltype=CL:0002253!1.82e-11!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;2.74e-50;2!CL:0002563;5.56e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.74e-50,2;CL:0002563,5.56e-26,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001155!3.08e-55!9;UBERON:0000059!2.83e-45!11;UBERON:0001154!2.30e-21!1;UBERON:0001153!2.30e-21!1;UBERON:0006834!2.82e-21!1;UBERON:0001301!6.31e-21!1;UBERON:0000160!5.71e-18!27;UBERON:0004907!4.28e-17!5;UBERON:0005409!5.10e-14!35;UBERON:0006947!7.26e-08!3;UBERON:0004054!7.26e-08!3 | |ontology_enrichment_uberon=UBERON:0001155!3.08e-55!9;UBERON:0000059!2.83e-45!11;UBERON:0001154!2.30e-21!1;UBERON:0001153!2.30e-21!1;UBERON:0006834!2.82e-21!1;UBERON:0001301!6.31e-21!1;UBERON:0000160!5.71e-18!27;UBERON:0004907!4.28e-17!5;UBERON:0005409!5.10e-14!35;UBERON:0006947!7.26e-08!3;UBERON:0004054!7.26e-08!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0001155;9.75e-45;9!UBERON:0000059;6.80e-37;11!UBERON:0001052;5.56e-26;4!UBERON:0001242;5.56e-26;4!UBERON:0001262;5.56e-26;4!UBERON:0004786;5.56e-26;4!UBERON:0004808;5.56e-26;4!UBERON:0001277;5.56e-26;4!UBERON:0000160;3.88e-23;17!UBERON:0004907;4.21e-21;5!UBERON:0005409;2.02e-18;22!UBERON:0000485;1.65e-15;7!UBERON:0003929;1.65e-15;7!UBERON:0003350;9.39e-14;8!UBERON:0004921;4.27e-13;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,9.75e-45,9;UBERON:0000059,6.80e-37,11;UBERON:0001052,5.56e-26,4;UBERON:0001242,5.56e-26,4;UBERON:0001262,5.56e-26,4;UBERON:0004786,5.56e-26,4;UBERON:0004808,5.56e-26,4;UBERON:0001277,5.56e-26,4;UBERON:0000160,3.88e-23,17;UBERON:0004907,4.21e-21,5;UBERON:0005409,1.86e-16,25;UBERON:0003350,9.39e-14,8;UBERON:0000485,2.19e-12,9 | |||
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|short_description=p@chr15:45950495..45950505,+ | |short_description=p@chr15:45950495..45950505,+ | ||
}} | }} |
Latest revision as of 02:05, 25 July 2015
Short description: | p@chr15:45950495..45950505, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:45950495..45950505, + |
Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.74e-50 | 2 |
intestinal epithelial cell | 5.56e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
colon | 9.75e-45 | 9 |
large intestine | 6.80e-37 | 11 |
rectum | 5.56e-26 | 4 |
intestinal mucosa | 5.56e-26 | 4 |
wall of intestine | 5.56e-26 | 4 |
gastrointestinal system mucosa | 5.56e-26 | 4 |
gastrointestinal system epithelium | 5.56e-26 | 4 |
intestinal epithelium | 5.56e-26 | 4 |
intestine | 3.88e-23 | 17 |
lower digestive tract | 4.21e-21 | 5 |
gastrointestinal system | 1.86e-16 | 25 |
epithelium of mucosa | 9.39e-14 | 8 |
simple columnar epithelium | 2.19e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.86e-08 | 14 |