FFCP PHASE1:Hg19::chr11:49364646..49364667,+: Difference between revisions
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|id=chr11:49364646..49364667,+
|short_description=p@chr11:49364646..49364667,+
|description=CAGE_peak_at_chr11:49364646..49364667,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:49364646..49364667,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_at_chr11:49364646..49364667,+ | |||
|id=chr11:49364646..49364667,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.85e-12!2;CL:0000095!3.55e-11!17;CL:0000123!3.55e-11!17;CL:0002319!4.76e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000123;7.05e-34;2!CL:0000242;7.05e-34;2!CL:0000095;5.66e-15;17!CL:0000312;1.83e-14;5!CL:0000240;2.74e-12;6!CL:0000311;2.74e-12;6!CL:0000079;2.74e-12;6!CL:0000237;2.74e-12;6!CL:0002319;6.90e-11;25!CL:0000362;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.05e-34,2;CL:0000095,5.66e-15,17;CL:0000123,5.66e-15,17;CL:0000312,1.83e-14,5;CL:0000240,2.74e-12,6;CL:0000311,2.74e-12,6;CL:0000079,2.74e-12,6;CL:0000237,2.74e-12,6;CL:0000036,2.74e-12,6;CL:0000357,2.74e-12,6;CL:0000114,2.74e-12,6;CL:0002319,6.90e-11,25;CL:0000362,1.21e-08,9;CL:0000333,3.05e-07,41 | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.62e-23;3!CL:0000357;2.74e-12;6!CL:0000114;2.74e-12;6!UBERON:0006238;2.47e-07;10 | |||
|ontology_enrichment_disease=DOID:3093!2.37e-08!11;DOID:5409!7.70e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:3093;7.92e-07;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,7.92e-07,11 | |||
|ontology_enrichment_uberon=UBERON:0000966!1.04e-18!5;UBERON:0005388!1.04e-18!5;UBERON:0001802!1.04e-18!5;UBERON:0000970!1.36e-10!20;UBERON:0002104!4.04e-10!21;UBERON:0000020!2.70e-09!23;UBERON:0001032!6.22e-09!24;UBERON:0004456!6.22e-09!24;UBERON:0002240!1.51e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.40e-14;5!UBERON:0005388;1.40e-14;5!UBERON:0001802;1.40e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6 | |||
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|short_description=p@chr11:49364646..49364667,+ | |||
}} | }} |
Latest revision as of 22:45, 23 July 2015
Short description: | p@chr11:49364646..49364667, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:49364646..49364667, + |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.05e-34 | 2 |
neuron associated cell | 5.66e-15 | 17 |
neuron associated cell (sensu Vertebrata) | 5.66e-15 | 17 |
keratinocyte | 1.83e-14 | 5 |
stratified squamous epithelial cell | 2.74e-12 | 6 |
keratin accumulating cell | 2.74e-12 | 6 |
stratified epithelial cell | 2.74e-12 | 6 |
keratinizing barrier epithelial cell | 2.74e-12 | 6 |
epithelial fate stem cell | 2.74e-12 | 6 |
stratified epithelial stem cell | 2.74e-12 | 6 |
surface ectodermal cell | 2.74e-12 | 6 |
neural cell | 6.90e-11 | 25 |
epidermal cell | 1.21e-08 | 9 |
migratory neural crest cell | 3.05e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 7.92e-07 | 11 |