FFCP PHASE1:Hg19::chr15:69222909..69222922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79400,246777 | |EntrezGene=79400,246777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14874,15570 | |HGNC=14874,15570 | ||
|TSSclassifier=strong | |||
|UniProt=F8W6M6,Q6UW49,Q96PH1 | |UniProt=F8W6M6,Q6UW49,Q96PH1 | ||
|association_with_transcript=45bp_to_ENST00000260364,ENST00000448182,uc002arn.1,uc002aro.2,uc002arp.1,uc002arq.1,uc010bid.1_5end | |association_with_transcript=45bp_to_ENST00000260364,ENST00000448182,uc002arn.1,uc002aro.2,uc002arp.1,uc002arq.1,uc010bid.1_5end | ||
|cluster_id=chr15:69222909..69222922,+ | |||
|description=CAGE_peak_2_at_NOX5_5end,CAGE_peak_2_at_SPESP1_5end | |description=CAGE_peak_2_at_NOX5_5end,CAGE_peak_2_at_SPESP1_5end | ||
|id=chr15:69222909..69222922,+ | |id=chr15:69222909..69222922,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.41e-08;7!CL:0000586;4.41e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.42e-08,7;CL:0000586,4.42e-08,7;CL:0000511,8.27e-07,1;CL:0002625,8.27e-07,1;CL:0000216,8.27e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.65e-14;10!UBERON:0005564;2.65e-14;10!UBERON:0003124;5.25e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.82e-07!8;UBERON:0003135!2.77e-07!11;UBERON:0000991!4.94e-07!21;UBERON:0009196!4.94e-07!21;UBERON:0009117!4.94e-07!21;UBERON:0005564!4.94e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.47e-25;8!UBERON:0003135;3.63e-18;11!UBERON:0000991;3.16e-09;21!UBERON:0003101;8.87e-09;22!UBERON:0000079;8.87e-09;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.78e-25,8;UBERON:0003135,3.10e-18,11;UBERON:0000991,2.92e-09,21;UBERON:0009196,2.92e-09,21;UBERON:0009117,2.92e-09,21;UBERON:0005564,2.92e-09,21;UBERON:0004176,8.23e-09,22;UBERON:0003101,8.23e-09,22;UBERON:0000079,8.23e-09,22;UBERON:0001136,8.27e-07,1;UBERON:0001343,8.27e-07,1;UBERON:0004910,8.27e-07,1;UBERON:0005154,8.27e-07,1;UBERON:0005295,8.27e-07,1;UBERON:0004813,8.27e-07,1;UBERON:0005297,8.27e-07,1;UBERON:0005294,8.27e-07,1;UBERON:0010141,8.27e-07,1;UBERON:0005891,8.27e-07,1 | |||
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| |phase1_expression=0,0,0.563817616383885,0,0.893922188854576,0,0,0,0,0,0,0,0.263766978228454,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,0.223915474239924,0,0.515151135268373,0,0,0,0,0.411167888021826,0,0,0,0.709446689665756,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0.632924774881769,0.845021145247767,0.212604299965044,0.628975936525128,0.44931452458598,0.150176892841506,0.32145117339416,1.14005097496499,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.255725123687061,0.722878304769133,0,0.434539556882471,0.795285947051099,0,0,0,0.087834785693126,0.392937226493138,0,0.370784442784429,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.71153252537342,0.33472061276467,0,0,0,0.367663080345869,0,0.446498641420399,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0.496971951695318,0,0.397227542439656,0.860509862246441,0.354668382198357,0,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0.624320153660641,0,0.149448680551801,0,0.485618833104395,0,0.204154171254893,0.122834317311768,0.619954687054593,0,0.247266929278557,0,0,0.336672227908132,0,1.38532057742091,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.423863802319124,0.900273288253207,1.33968288009971,0.257640540045629,0.558350568994769,0.675105328965065,0.68205903612839,0,0.276149695926898,0.323292113637624,0,0,0,0,0.818238361772504,0,0,0,0,0,0.252320850875628,0,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.878002283269004,0,0.100528972411631,0.462942225792648,0,0,0,0.115930404975077,0.352226082707465,0.433099343283221,0.462985512576611,0.190254152234598,0,1.71697232418975,0,0,0.148631162288728,0,1.34385702559088,0.425325291727159,0,0.871901815541886,0,0,0.088048434013226,0,0,0,0.444485260045183,0,0,0,0,0,0,0,0.43596006883328,0.22001485746285,0,3.57656445851882,0,0.531876233169741,0,0.257207374262142,0,0,0.57191197463259,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0.946214490203608,0,0,0,1.03473071292505,0,0,0.260650843404249,0,0,0.206768026122887,0,0.106727557803444,0,0,0.30239029332968,0,0,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0,0.177561725313127,0.574890092096664,0.519254429183621,0.116210378459959,0,0,0.460404944679482,0.114814448164607,0,0.131124414959424,0.451199612907412,0.462092022626489,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0.657779629937804,0,0.512900250232778,0,0,0.721287081534056,0,0,0,0,1.6068392984416,0,0.154048617114644,0.307007349452259,0.413509717453592,0.107420244868274,0,0,0.178064071293475,0.165284915360978,0,0.382838137483752,0.50578890427775,0,0.94443704049192,0,0,0,0,0.37064843820784,1.14499909393593,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0.421258456238981,0,0.487426979262569,0,0.409499734223957,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0,0.987884678879706,0,0,0.288666338176536,0,0,1.22386941009813,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,5.79445320064835,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0.7812832832557,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.975966209950223,0,0.569710279235006,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0,0,0.397429223405979,0.0633107959558787,0,1.12222348352147,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0.717873024576814,0,0,0,0.53746777989381,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,1.24643300672138,0,0,0,0,0,0,0.106787412567695,0,0,0,3.95223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,5.99477200444432,0,0,0,0.597019211547496,0,0,1.7046270474758,0,0,0.457680136793847,0,0.777186002913902,0.295710299979268,0,0.449803112163605,0,0.829412415681711,0,0,0,0,0.406870733204662,0.181848659202559,0.859284456339908,0.464033759878494,0,0,0,0,0,0,0,1.56596575179127,0,0.463044948647668,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18812770967818,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,1.1441462864015,0,2.18807844327902,0.225630985047772,1.81534561833168,0,0,0,0,0,0,0,0,0,0,0,1.58284119923659,1.53314913167514,0,0,0,0,2.57236873471653,0,0,0,0,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| ||
|short_description=p2@NOX5,p2@SPESP1 | |short_description=p2@NOX5,p2@SPESP1 | ||
}} | }} |
Latest revision as of 19:20, 18 September 2015
Short description: | p2@NOX5, p2@SPESP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NOX5_5end, CAGE_peak_2_at_SPESP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000260364, ENST00000448182, uc002arn.1, uc002aro.2, uc002arp.1, uc002arq.1, uc010bid.1_5end |
EntrezGene: | 79400,246777 |
HGNC: | 15570&submit=Submit 14874, 15570 |
UniProt: | F8W6M6Q6UW49Q96PH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.42e-08 | 7 |
germ cell | 4.42e-08 | 7 |
androgen binding protein secreting cell | 8.27e-07 | 1 |
seminiferous tubule epithelial cell | 8.27e-07 | 1 |
Sertoli cell | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 2.78e-25 | 8 |
male reproductive organ | 3.10e-18 | 11 |
gonad | 2.92e-09 | 21 |
indifferent external genitalia | 2.92e-09 | 21 |
indifferent gonad | 2.92e-09 | 21 |
gonad primordium | 2.92e-09 | 21 |
external genitalia | 8.23e-09 | 22 |
male organism | 8.23e-09 | 22 |
male reproductive system | 8.23e-09 | 22 |
mesothelium | 8.27e-07 | 1 |
seminiferous tubule of testis | 8.27e-07 | 1 |
epithelium of male gonad | 8.27e-07 | 1 |
epithelial cord | 8.27e-07 | 1 |
sex cord | 8.27e-07 | 1 |
seminiferous tubule epithelium | 8.27e-07 | 1 |
testis sex cord | 8.27e-07 | 1 |
genital ridge | 8.27e-07 | 1 |
primitive sex cord of indifferent gonad | 8.27e-07 | 1 |
coelomic epithelium | 8.27e-07 | 1 |