FFCP PHASE1:Hg19::chr11:5618029..5618043,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:5618029..5618043,+
|short_description=p3@TRIM6
|description=CAGE_peak_3_at_TRIM6_5end
|association_with_transcript=0bp_to_ENST00000506134,ENST00000515022_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=117854 | |EntrezGene=117854 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16277 | |HGNC=16277 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDQ5 | |UniProt=B4DDQ5 | ||
|association_with_transcript=0bp_to_ENST00000506134,ENST00000515022_5end | |||
|cluster_id=chr11:5618029..5618043,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_TRIM6_5end | |||
|id=chr11:5618029..5618043,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000650;1.42e-09;2!CL:1000500;1.42e-09;2!CL:1000618;1.42e-09;2!CL:1001318;1.42e-09;2!CL:0002173;1.42e-09;2!CL:0000077;3.71e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,8.33e-10,2;CL:1000500,8.33e-10,2;CL:1000618,8.33e-10,2;CL:1001318,8.33e-10,2;CL:0002173,8.33e-10,2;CL:0000077,3.92e-08,19;CL:0000064,8.31e-07,3;CL:0000067,8.31e-07,3;CL:0005012,8.31e-07,3;CL:0002304,8.31e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.08e-07;10!UBERON:0007687;1.08e-07;10 | |||
|ontology_enrichment_disease=DOID:193!3.98e-10!29;DOID:120!9.84e-09!27;DOID:2394!3.96e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:193,9.02e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0007625!6.14e-08!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;7.96e-10;2!UBERON:0003567;1.42e-09;2!UBERON:0003838;1.42e-09;2!UBERON:0003586;1.42e-09;2!UBERON:0005169;1.42e-09;2!UBERON:0002321;1.42e-09;2!UBERON:0005215;1.42e-09;2!UBERON:0002303;1.42e-09;2!UBERON:0002319;1.42e-09;2!UBERON:0001044;4.14e-07;6!UBERON:0003293;4.14e-07;6!UBERON:0003294;4.14e-07;6!UBERON:0010047;4.14e-07;6!UBERON:0003408;4.14e-07;6!UBERON:0000167;4.14e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,8.33e-10,2;UBERON:0003838,8.33e-10,2;UBERON:0003586,8.33e-10,2;UBERON:0005169,8.33e-10,2;UBERON:0002321,8.33e-10,2;UBERON:0005215,8.33e-10,2;UBERON:0002303,8.33e-10,2;UBERON:0002319,8.33e-10,2;UBERON:0001829,1.09e-09,2;UBERON:0001044,4.87e-07,6;UBERON:0003293,4.87e-07,6;UBERON:0003294,4.87e-07,6;UBERON:0010047,4.87e-07,6;UBERON:0000167,4.87e-07,6;UBERON:0001778,8.31e-07,3;UBERON:0001775,8.31e-07,3 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0.472674085820339,1.55210578223795,1.75669571386252,15.7829785974744,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,0,0.709336764396714,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,4.3299402607582,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.6709458822416,0.176096868026452,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,12.6604538365026,0.871533458600294,24.0934908748757,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.328508624055237,0,0.232420756919918,0,0,0.0920809889358963,1.49258782613989,0,0.393373244878272,0,0.385076685522074,0,0,0,0,0,0,0,1.89662506280697,1.50506932156456,0.509752546090077,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.571890581771475,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0.281695602532241,1.00387946542836,0.196498082026242,0,1.06428319221179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0.432807638929335,0,0,2.79411120005943,0.191505370132367,0,0,3.93116049358842,0,0,2.50634477090067,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,21.6496779198583,0,0,0,0,0,0,0,0,0,0,0,1.11308705022906,0,0.211125408127993,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0.470940769185074,16.6211681900156,0,0.19606253431774,0,0,4.76809736941136,0,8.48810602427568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,5.50355303909173,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,18.5193412153116,3.67182116944987,0,0,0,0,0,0,0,0,0.326587360109409,0,11.9855080294035,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0.477890301491107,0,0,0.414706207840855,0.53168342911599,0.521745061811734,2.10360652596106,9.90093551638868,3.25496586563729,0,1.93339002676479,0.464033759878494,0.398095888698616,0,0,0,0,0,0.428883182749851,0,1.13352962756136,0.231522474323834,0.244736704506468,0,0,0.219284049578707,3.35709377297174,3.66536672714738,1.35153952522458,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0.637724760305049,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.981477185010256,0,0.733714394086716,0.115525666150338,0.381382095467167,0,0,0.225630985047772,1.21023041222112,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0,0,0,8.42117605752624,2.38875843943525,0.214429632529969,0,0,0,0,0,0,0,1.29068207646083,0,0,0.846774100381858,0.22910686854405,0.31020638566432,1.91107787795487,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,1.07132363163395,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.303114792872958,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0.856402095563933,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0.361439152384566,0,0,0,0,0.472674085820339,1.55210578223795,1.75669571386252,15.7829785974744,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.633152558322899,0.132409180813219,0,0.709336764396714,0.560677600142307,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,4.3299402607582,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,55.6709458822416,0.176096868026452,0.414656231081544,0.288239906833923,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0.791951872933429,12.6604538365026,0.871533458600294,24.0934908748757,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.328508624055237,0,0.232420756919918,0,0,0.0920809889358963,1.49258782613989,0,0.393373244878272,0,0.385076685522074,0,0,0,0,0,0,0,1.89662506280697,1.50506932156456,0.509752546090077,0,0.447749509444357,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0.316379424718726,0.571890581771475,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.272999822815972,0,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0.281695602532241,1.00387946542836,0.196498082026242,0,1.06428319221179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0.432807638929335,0,0,2.79411120005943,0.191505370132367,0,0,3.93116049358842,0,0,2.50634477090067,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,21.6496779198583,0,0,0,0,0,0,0,0,0,0,0,1.11308705022906,0,0.211125408127993,0,0,0,0,0,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0.113942055847001,0,0,0,0,0.183195186803725,0,0,0.470940769185074,16.6211681900156,0,0.19606253431774,0,0,4.76809736941136,0,8.48810602427568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0,5.50355303909173,0,0,0,0.290967049465258,0,0,0,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,1.28929632425987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,18.5193412153116,3.67182116944987,0,0,0,0,0,0,0,0,0.326587360109409,0,11.9855080294035,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55336503108073,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.467426619694449,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0.477890301491107,0,0,0.414706207840855,0.53168342911599,0.521745061811734,2.10360652596106,9.90093551638868,3.25496586563729,0,1.93339002676479,0.464033759878494,0.398095888698616,0,0,0,0,0,0.428883182749851,0,1.13352962756136,0.231522474323834,0.244736704506468,0,0,0.219284049578707,3.35709377297174,3.66536672714738,1.35153952522458,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0.637724760305049,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0.981477185010256,0,0.733714394086716,0.115525666150338,0.381382095467167,0,0,0.225630985047772,1.21023041222112,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0.0657727735628491,0.118193840883968,0.111231401892069,0,0,0,0,8.42117605752624,2.38875843943525,0.214429632529969,0,0,0,0,0,0,0,1.29068207646083,0,0,0.846774100381858,0.22910686854405,0.31020638566432,1.91107787795487,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,1.07132363163395,0,0,0,2.2936464170227,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.303114792872958,0,0,0,0,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0.134704106029175,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p3@TRIM6 | |||
}} | }} |
Latest revision as of 08:15, 18 September 2015
Short description: | p3@TRIM6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM6_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000506134, ENST00000515022_5end |
EntrezGene: | TRIM6 |
HGNC: | 16277 |
UniProt: | B4DDQ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 8.33e-10 | 2 |
kidney interstitial cell | 8.33e-10 | 2 |
juxtaglomerular complex cell | 8.33e-10 | 2 |
renal interstitial pericyte | 8.33e-10 | 2 |
extraglomerular mesangial cell | 8.33e-10 | 2 |
mesothelial cell | 3.92e-08 | 19 |
ciliated cell | 8.31e-07 | 3 |
ciliated epithelial cell | 8.31e-07 | 3 |
multi-ciliated epithelial cell | 8.31e-07 | 3 |
non-pigmented ciliary epithelial cell | 8.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 8.33e-10 | 2 |
abdominal segment connective tissue | 8.33e-10 | 2 |
trunk connective tissue | 8.33e-10 | 2 |
interstitial tissue | 8.33e-10 | 2 |
extraglomerular mesangium | 8.33e-10 | 2 |
kidney interstitium | 8.33e-10 | 2 |
juxtaglomerular apparatus | 8.33e-10 | 2 |
mesangium | 8.33e-10 | 2 |
major salivary gland | 1.09e-09 | 2 |
saliva-secreting gland | 4.87e-07 | 6 |
gland of oral region | 4.87e-07 | 6 |
gland of foregut | 4.87e-07 | 6 |
oral gland | 4.87e-07 | 6 |
oral cavity | 4.87e-07 | 6 |
ciliary epithelium | 8.31e-07 | 3 |
ciliary body | 8.31e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive organ cancer | 9.02e-07 | 29 |