FFCP PHASE1:Hg19::chr15:71389281..71389306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79875 | |EntrezGene=79875 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25835 | |HGNC=25835 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMP0 | |UniProt=Q6ZMP0 | ||
|association_with_transcript=0bp_to_ENST00000355327_5end | |association_with_transcript=0bp_to_ENST00000355327_5end | ||
|cluster_id=chr15:71389281..71389306,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_4_at_THSD4_5end | |description=CAGE_peak_4_at_THSD4_5end | ||
|id=chr15:71389281..71389306,+ | |id=chr15:71389281..71389306,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.66e-15!43;CL:0000223!7.53e-12!59;CL:0000066!1.17e-11!254;CL:0000220!3.66e-09!246;CL:0002368!3.98e-09!13;CL:0000076!4.81e-09!62;CL:0002321!5.51e-09!248;CL:1000306!2.57e-08!4;CL:0002547!2.57e-08!4;CL:0002251!8.27e-08!21;CL:0002621!1.71e-07!3 | |ontology_enrichment_celltype=CL:0002076!1.66e-15!43;CL:0000223!7.53e-12!59;CL:0000066!1.17e-11!254;CL:0000220!3.66e-09!246;CL:0002368!3.98e-09!13;CL:0000076!4.81e-09!62;CL:0002321!5.51e-09!248;CL:1000306!2.57e-08!4;CL:0002547!2.57e-08!4;CL:0002251!8.27e-08!21;CL:0002621!1.71e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002159;3.50e-18;14!CL:0000317;7.20e-16;2!CL:1000448;7.20e-16;2!CL:0002308;7.20e-16;2!CL:0002140;7.20e-16;2!CL:0000362;2.83e-13;9!CL:0000240;2.75e-11;6!CL:0000311;2.75e-11;6!CL:0000079;2.75e-11;6!CL:0000237;2.75e-11;6!CL:0002621;8.88e-11;3!CL:0002166;1.97e-10;3!CL:0002076;3.30e-09;42!CL:0002601;1.91e-08;1!CL:0002336;3.17e-08;1!CL:0002261;3.17e-08;1!CL:0002170;3.17e-08;1!CL:0000244;3.94e-08;4!CL:0000731;3.94e-08;4!CL:0000622;7.38e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,3.50e-18,14;CL:0000317,5.99e-16,2;CL:1000448,5.99e-16,2;CL:0002308,5.99e-16,2;CL:0002140,5.99e-16,2;CL:0000076,3.09e-14,63;CL:0000362,2.66e-13,9;CL:0000066,4.28e-12,253;CL:0000240,2.85e-11,6;CL:0000311,2.85e-11,6;CL:0000079,2.85e-11,6;CL:0000237,2.85e-11,6;CL:0000036,2.85e-11,6;CL:0000357,2.85e-11,6;CL:0000114,2.85e-11,6;CL:0002621,9.56e-11,3;CL:0002166,2.16e-10,3;CL:0002076,7.79e-10,42;CL:0002601,2.29e-08,1;CL:0002336,3.28e-08,1;CL:0002261,3.28e-08,1;CL:0002170,3.28e-08,1;CL:0000244,4.23e-08,4;CL:0000731,4.23e-08,4;CL:0002077,3.49e-07,34;CL:0000622,6.87e-07,5;CL:0000223,8.10e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000357;2.75e-11;6!CL:0000114;2.75e-11;6!UBERON:0008425;3.17e-08;1 | |||
|ontology_enrichment_disease=DOID:1749!3.12e-16!14 | |ontology_enrichment_disease=DOID:1749!3.12e-16!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;2.60e-24;14!DOID:5093;3.94e-08;4!DOID:1612;3.94e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.79e-24,14;DOID:5093,3.54e-08,4;DOID:1612,3.54e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003729!3.10e-10!5;UBERON:0000161!5.87e-09!35;UBERON:0003937!7.92e-09!12;UBERON:0005399!7.92e-09!12;UBERON:0003343!2.29e-08!4;UBERON:0004785!2.29e-08!4;UBERON:0000415!2.57e-08!4;UBERON:0007240!2.57e-08!4;UBERON:0005742!2.57e-08!4;UBERON:0005734!2.57e-08!4;UBERON:0004664!2.57e-08!4;UBERON:0004663!2.57e-08!4;UBERON:0005153!6.44e-08!37;UBERON:0001949!1.71e-07!3;UBERON:0002367!1.79e-07!11;UBERON:0010147!1.79e-07!11;UBERON:0009846!1.79e-07!11;UBERON:0003353!1.79e-07!11;UBERON:0004902!1.79e-07!11;UBERON:0003820!1.79e-07!11;UBERON:0009847!1.79e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.20e-16;2!UBERON:0007771;7.20e-16;2!UBERON:0003297;7.20e-16;2!UBERON:0001821;7.20e-16;2!UBERON:0003487;7.20e-16;2!UBERON:0001820;7.20e-16;2!UBERON:0001949;8.88e-11;3!UBERON:0000486;6.78e-10;12!UBERON:0003729;4.45e-09;13!UBERON:0000997;1.23e-08;1!UBERON:0005056;1.23e-08;1!UBERON:0004176;1.23e-08;1!UBERON:0001708;4.88e-08;4!UBERON:0008895;4.88e-08;4!UBERON:0001003;5.16e-08;15!UBERON:0007376;5.16e-08;15!UBERON:0010371;7.81e-08;31!UBERON:0000310;5.55e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.99e-16,2;UBERON:0007771,5.99e-16,2;UBERON:0003297,5.99e-16,2;UBERON:0001821,5.99e-16,2;UBERON:0003487,5.99e-16,2;UBERON:0001820,5.99e-16,2;UBERON:0005089,5.99e-16,2;UBERON:0005088,5.99e-16,2;UBERON:0001949,9.56e-11,3;UBERON:0003729,4.89e-09,13;UBERON:0000997,1.18e-08,1;UBERON:0005056,1.18e-08,1;UBERON:0001003,4.97e-08,15;UBERON:0007376,4.97e-08,15;UBERON:0007383,4.97e-08,15;UBERON:0001708,5.24e-08,4;UBERON:0008895,5.24e-08,4;UBERON:0000310,4.95e-07,10;UBERON:0003102,6.47e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,1.45650098894541,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.966304265816484,4.63668405004419,3.44165514466805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52425656439839,0,4.42327478611176,1.29623823221941,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,2.18376766658517,2.26840155587818,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.532685175939381,0.0821271560138091,0,0,0,8.22076528243468,0.736647911487171,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,10.9110452219273,3.90036147621913,0,0.096670718292122,0,0,0,0,0,0,0,0.991709492165869,0.768760269460425,4.72167036229961,0.50578890427775,0,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.563391205064483,0.860468113224309,0.0982490410131212,0,2.12856638442359,0,0,0,0,0.769776901804097,0,1.08890984861323,0,1.29151611801369,0,0.886860307073351,5.05391480455311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,5.4689829827899,1.66173999992772,2.89999830173917,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,3.5277263069176,1.04471047896483,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34340638123612,0,0,0,0,3.45688596480507,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0.706756583783524,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,3.30315225373673,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67830907908486,42.347384605883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,1.45650098894541,0.573673241497627,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0,0,0,0,0,0.355009592516614,0,0,0.966304265816484,4.63668405004419,3.44165514466805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52425656439839,0,4.42327478611176,1.29623823221941,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0,2.18376766658517,2.26840155587818,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.157702415033935,0.585707074963566,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0.532685175939381,0.0821271560138091,0,0,0,8.22076528243468,0.736647911487171,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,10.9110452219273,3.90036147621913,0,0.096670718292122,0,0,0,0,0,0,0,0.991709492165869,0.768760269460425,4.72167036229961,0.50578890427775,0,0.62962469366128,0,0.308033580176089,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.272999822815972,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0,0.563391205064483,0.860468113224309,0.0982490410131212,0,2.12856638442359,0,0,0,0,0.769776901804097,0,1.08890984861323,0,1.29151611801369,0,0.886860307073351,5.05391480455311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0,0,5.4689829827899,1.66173999992772,2.89999830173917,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0.113942055847001,0,0,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,3.5277263069176,1.04471047896483,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34340638123612,0,0,0,0,3.45688596480507,0,0,0,0.340776043570843,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,3.83004754662109,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0.706756583783524,0.192914038270915,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,3.30315225373673,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.222462803784138,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67830907908486,42.347384605883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@THSD4 | |short_description=p4@THSD4 | ||
}} | }} |
Latest revision as of 21:13, 18 September 2015
Short description: | p4@THSD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_THSD4_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | 0bp_to_ENST00000355327_5end |
EntrezGene: | THSD4 |
HGNC: | 25835 |
UniProt: | Q6ZMP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 3.50e-18 | 14 |
sebum secreting cell | 5.99e-16 | 2 |
epithelial cell of sweat gland | 5.99e-16 | 2 |
epithelial cell of skin gland | 5.99e-16 | 2 |
acinar cell of sebaceous gland | 5.99e-16 | 2 |
squamous epithelial cell | 3.09e-14 | 63 |
epidermal cell | 2.66e-13 | 9 |
epithelial cell | 4.28e-12 | 253 |
stratified squamous epithelial cell | 2.85e-11 | 6 |
keratin accumulating cell | 2.85e-11 | 6 |
stratified epithelial cell | 2.85e-11 | 6 |
keratinizing barrier epithelial cell | 2.85e-11 | 6 |
epithelial fate stem cell | 2.85e-11 | 6 |
stratified epithelial stem cell | 2.85e-11 | 6 |
surface ectodermal cell | 2.85e-11 | 6 |
gingival epithelial cell | 9.56e-11 | 3 |
epithelial cell of Malassez | 2.16e-10 | 3 |
endo-epithelial cell | 7.79e-10 | 42 |
uterine smooth muscle cell | 2.29e-08 | 1 |
buccal mucosa cell | 3.28e-08 | 1 |
endothelial cell of viscerocranial mucosa | 3.28e-08 | 1 |
keratinized cell of the oral mucosa | 3.28e-08 | 1 |
transitional epithelial cell | 4.23e-08 | 4 |
urothelial cell | 4.23e-08 | 4 |
ecto-epithelial cell | 3.49e-07 | 34 |
acinar cell | 6.87e-07 | 5 |
endodermal cell | 8.10e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.99e-16 | 2 |
epidermis gland | 5.99e-16 | 2 |
gland of integumental system | 5.99e-16 | 2 |
sebaceous gland | 5.99e-16 | 2 |
skin sebaceous gland | 5.99e-16 | 2 |
sweat gland | 5.99e-16 | 2 |
sweat gland placode | 5.99e-16 | 2 |
sebaceous gland placode | 5.99e-16 | 2 |
gingival epithelium | 9.56e-11 | 3 |
mouth mucosa | 4.89e-09 | 13 |
mammalian vulva | 1.18e-08 | 1 |
external female genitalia | 1.18e-08 | 1 |
skin epidermis | 4.97e-08 | 15 |
outer epithelium | 4.97e-08 | 15 |
enveloping layer of ectoderm | 4.97e-08 | 15 |
jaw skeleton | 5.24e-08 | 4 |
splanchnocranium | 5.24e-08 | 4 |
breast | 4.95e-07 | 10 |
surface structure | 6.47e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.79e-24 | 14 |
thoracic cancer | 3.54e-08 | 4 |
breast cancer | 3.54e-08 | 4 |