FFCP PHASE1:Hg19::chr1:44584568..44584585,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128209 | |EntrezGene=128209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18830 | |HGNC=18830 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000476802_5end | |association_with_transcript=26bp_to_ENST00000476802_5end | ||
|cluster_id=chr1:44584568..44584585,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_3_at_KLF17_5end | |description=CAGE_peak_3_at_KLF17_5end | ||
|id=chr1:44584568..44584585,+ | |id=chr1:44584568..44584585,+ | ||
|ontology_enrichment_celltype=CL:0000039!9.49e-65!7;CL:0000586!9.49e-65!7 | |ontology_enrichment_celltype=CL:0000039!9.49e-65!7;CL:0000586!9.49e-65!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;6.87e-64;7!CL:0000586;6.87e-64;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.87e-64,7;CL:0000586,6.87e-64,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.79e-79;10!UBERON:0005564;5.79e-79;10!UBERON:0006603;6.03e-09;65 | |||
|ontology_enrichment_disease=DOID:3095!4.16e-21!22;DOID:2994!4.16e-21!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.99e-21;22!DOID:2994;3.99e-21;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.99e-21,22;DOID:2994,3.99e-21,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!4.36e-126!8;UBERON:0003135!6.65e-92!11;UBERON:0000991!1.92e-48!21;UBERON:0009196!1.92e-48!21;UBERON:0009117!1.92e-48!21;UBERON:0005564!1.92e-48!21;UBERON:0004176!2.88e-46!22;UBERON:0003101!2.88e-46!22;UBERON:0000079!2.88e-46!22;UBERON:0002323!2.27e-22!46;UBERON:0003133!1.87e-21!48;UBERON:0004458!5.03e-21!49;UBERON:0005156!1.61e-17!59;UBERON:0000990!1.61e-17!59;UBERON:0003886!1.98e-16!63;UBERON:0002553!8.13e-15!70;UBERON:0000464!4.75e-10!104;UBERON:0000466!2.53e-08!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.26e-98;8!UBERON:0003135;6.65e-72;11!UBERON:0000991;3.06e-38;21!UBERON:0003101;1.49e-36;22!UBERON:0000079;1.49e-36;22!UBERON:0003133;9.24e-16;44!UBERON:0002323;6.01e-15;45!UBERON:0005156;3.57e-11;59!UBERON:0000990;3.57e-11;59!UBERON:0002553;9.96e-11;52!UBERON:0000922;1.21e-08;49!UBERON:0004458;8.01e-08;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.26e-98,8;UBERON:0003135,6.65e-72,11;UBERON:0000991,3.06e-38,21;UBERON:0009196,3.06e-38,21;UBERON:0009117,3.06e-38,21;UBERON:0005564,3.06e-38,21;UBERON:0004176,1.49e-36,22;UBERON:0003101,1.49e-36,22;UBERON:0000079,1.49e-36,22;UBERON:0002323,5.01e-18,46;UBERON:0003133,2.57e-17,48;UBERON:0004458,5.55e-17,49;UBERON:0003886,1.70e-15,54;UBERON:0005156,2.92e-14,59;UBERON:0000990,2.92e-14,59;UBERON:0002553,7.99e-14,61 | |||
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|short_description=p3@KLF17 | |short_description=p3@KLF17 | ||
}} | }} |
Latest revision as of 05:54, 18 September 2015
Short description: | p3@KLF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KLF17_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 26bp_to_ENST00000476802_5end |
EntrezGene: | KLF17 |
HGNC: | 18830 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.87e-64 | 7 |
germ cell | 6.87e-64 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 2.26e-98 | 8 |
male reproductive organ | 6.65e-72 | 11 |
gonad | 3.06e-38 | 21 |
indifferent external genitalia | 3.06e-38 | 21 |
indifferent gonad | 3.06e-38 | 21 |
gonad primordium | 3.06e-38 | 21 |
external genitalia | 1.49e-36 | 22 |
male organism | 1.49e-36 | 22 |
male reproductive system | 1.49e-36 | 22 |
body cavity | 5.01e-18 | 46 |
reproductive organ | 2.57e-17 | 48 |
body cavity or lining | 5.55e-17 | 49 |
body cavity precursor | 1.70e-15 | 54 |
reproductive structure | 2.92e-14 | 59 |
reproductive system | 2.92e-14 | 59 |
anatomical cavity | 7.99e-14 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.99e-21 | 22 |
germ cell cancer | 3.99e-21 | 22 |