FFCP PHASE1:Hg19::chr16:50667519..50667529,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:50667519..50667529,+ | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_at_chr16:50667519..50667529,+ | |description=CAGE_peak_at_chr16:50667519..50667529,+ | ||
|id=chr16:50667519..50667529,+ | |id=chr16:50667519..50667529,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.85e-30;12!CL:0002615;1.71e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.45e-30,12;CL:0002615,2.09e-14,3;CL:0000223,6.14e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.30e-33;11!UBERON:0009497;5.04e-28;13!UBERON:0001041;1.14e-12;30!UBERON:0003104;4.96e-12;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:7;2.29e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,5.89e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.08e-17!115;UBERON:0001049!3.11e-11!57;UBERON:0005068!3.11e-11!57;UBERON:0006241!3.11e-11!57;UBERON:0007135!3.11e-11!57;UBERON:0001017!3.32e-09!82;UBERON:0005743!1.24e-08!86;UBERON:0002616!1.20e-07!59;UBERON:0003075!1.38e-07!86;UBERON:0007284!1.38e-07!86;UBERON:0000073!1.60e-07!94;UBERON:0001016!1.60e-07!94;UBERON:0000955!2.91e-07!69;UBERON:0006238!2.91e-07!69;UBERON:0002346!4.04e-07!90;UBERON:0003076!5.78e-07!15;UBERON:0003057!5.78e-07!15;UBERON:0002240!7.58e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.73e-19;19!UBERON:0006925;1.73e-19;19!UBERON:0002423;4.96e-15;25!UBERON:0002365;2.16e-11;31!UBERON:0002330;2.16e-11;31!UBERON:0002368;9.45e-11;33!UBERON:0000949;1.90e-08;43!UBERON:0003688;6.55e-08;6!UBERON:0002358;6.55e-08;6!UBERON:0003684;6.55e-08;6!UBERON:0001178;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.58e-19,19;UBERON:0006925,1.58e-19,19;UBERON:0008836,1.58e-19,19;UBERON:0008835,5.41e-17,22;UBERON:0003894,5.41e-17,22;UBERON:0009854,2.71e-16,23;UBERON:0007499,4.61e-15,25;UBERON:0009497,4.61e-15,25;UBERON:0000015,4.61e-15,25;UBERON:0002423,4.61e-15,25;UBERON:0006235,4.61e-15,25;UBERON:0004161,4.61e-15,25;UBERON:0009856,1.62e-14,26;UBERON:0002365,2.58e-12,31;UBERON:0002330,2.58e-12,31;UBERON:0002417,3.21e-11,60;UBERON:0000916,3.21e-11,60;UBERON:0002368,5.30e-11,35;UBERON:0000949,9.88e-09,45;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6;UBERON:0003929,2.12e-07,54;UBERON:0005172,2.12e-07,54;UBERON:0005173,2.12e-07,54;UBERON:0002530,7.84e-07,59 | |||
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| ||
|short_description=p@chr16:50667519..50667529,+ | |short_description=p@chr16:50667519..50667529,+ | ||
}} | }} |
Latest revision as of 09:32, 25 July 2015
Short description: | p@chr16:50667519..50667529, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50667519..50667529, + |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.45e-30 | 12 |
adipocyte of omentum tissue | 2.09e-14 | 3 |
endodermal cell | 6.14e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.58e-19 | 19 |
digestive gland | 1.58e-19 | 19 |
liver bud | 1.58e-19 | 19 |
hepatic diverticulum | 5.41e-17 | 22 |
liver primordium | 5.41e-17 | 22 |
digestive tract diverticulum | 2.71e-16 | 23 |
epithelial sac | 4.61e-15 | 25 |
epithelium of foregut-midgut junction | 4.61e-15 | 25 |
anatomical boundary | 4.61e-15 | 25 |
hepatobiliary system | 4.61e-15 | 25 |
foregut-midgut junction | 4.61e-15 | 25 |
septum transversum | 4.61e-15 | 25 |
sac | 1.62e-14 | 26 |
exocrine gland | 2.58e-12 | 31 |
exocrine system | 2.58e-12 | 31 |
abdominal segment of trunk | 3.21e-11 | 60 |
abdomen | 3.21e-11 | 60 |
endocrine gland | 5.30e-11 | 35 |
endocrine system | 9.88e-09 | 45 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
gut epithelium | 2.12e-07 | 54 |
abdomen element | 2.12e-07 | 54 |
abdominal segment element | 2.12e-07 | 54 |
gland | 7.84e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 5.89e-10 | 39 |