FFCP PHASE1:Hg19::chr1:95582429..95582442,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=148534 | |EntrezGene=148534 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26477 | |HGNC=26477 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MV1 | |UniProt=Q96MV1 | ||
|association_with_transcript=-451bp_to_ENST00000370203,NM_152487,uc001drb.2_5end | |association_with_transcript=-451bp_to_ENST00000370203,NM_152487,uc001drb.2_5end | ||
|cluster_id=chr1:95582429..95582442,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_7_at_TMEM56_5end | |description=CAGE_peak_7_at_TMEM56_5end | ||
|id=chr1:95582429..95582442,+ | |id=chr1:95582429..95582442,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;7.67e-21;2!CL:0000558;7.67e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,7.70e-21,2;CL:0000765,7.70e-21,2;CL:0000050,7.70e-21,2;CL:0000038,7.70e-21,2;CL:0000558,7.70e-21,2;CL:0000547,7.70e-21,2;CL:0000549,7.70e-21,2;CL:0000550,7.70e-21,2;CL:0000552,7.70e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.16e-08;11!UBERON:0009497;3.57e-07;13 | |||
|ontology_enrichment_disease=DOID:305!2.33e-10!106;DOID:0050687!3.94e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1036;2.75e-19;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,2.70e-19,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.77e-34!115;UBERON:0001869!1.38e-23!32;UBERON:0001893!1.81e-23!34;UBERON:0002780!2.46e-23!41;UBERON:0001890!2.46e-23!41;UBERON:0006240!2.46e-23!41;UBERON:0003080!1.47e-22!42;UBERON:0002791!2.36e-22!33;UBERON:0001049!1.51e-20!57;UBERON:0005068!1.51e-20!57;UBERON:0006241!1.51e-20!57;UBERON:0007135!1.51e-20!57;UBERON:0002020!8.19e-20!34;UBERON:0003528!8.19e-20!34;UBERON:0003075!1.32e-18!86;UBERON:0007284!1.32e-18!86;UBERON:0003056!2.31e-18!61;UBERON:0002346!3.37e-17!90;UBERON:0002619!5.78e-17!22;UBERON:0000955!8.55e-17!69;UBERON:0006238!8.55e-17!69;UBERON:0002616!1.21e-16!59;UBERON:0001017!1.21e-16!82;UBERON:0005743!1.82e-16!86;UBERON:0000956!4.07e-16!25;UBERON:0000203!4.07e-16!25;UBERON:0001950!6.77e-15!20;UBERON:0000073!8.89e-14!94;UBERON:0001016!8.89e-14!94;UBERON:0000153!1.48e-10!129;UBERON:0007811!1.48e-10!129;UBERON:0000033!2.21e-10!123;UBERON:0001737!5.79e-10!9;UBERON:0002420!1.61e-09!9;UBERON:0007245!1.61e-09!9;UBERON:0010009!1.61e-09!9;UBERON:0010011!1.61e-09!9;UBERON:0000454!1.61e-09!9;UBERON:0000200!3.48e-09!6;UBERON:0001871!2.33e-08!7;UBERON:0000477!5.97e-08!286;UBERON:0004121!8.88e-08!169;UBERON:0000349!1.70e-07!5;UBERON:0000025!2.48e-07!194;UBERON:0000924!2.55e-07!173;UBERON:0006601!2.55e-07!173;UBERON:0000064!4.00e-07!219;UBERON:0009663!5.45e-07!7;UBERON:0009854!9.17e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.54e-08;19!UBERON:0006925;2.54e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.75e-08,19;UBERON:0006925,2.75e-08,19;UBERON:0008836,2.75e-08,19;UBERON:0008835,3.55e-07,22;UBERON:0003894,3.55e-07,22;UBERON:0009854,7.19e-07,23 | |||
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| ||
|short_description=p7@TMEM56 | |short_description=p7@TMEM56 | ||
}} | }} |
Latest revision as of 23:47, 19 September 2015
Short description: | p7@TMEM56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TMEM56_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -451bp_to_ENST00000370203, NM_152487, uc001drb.2_5end |
EntrezGene: | TMEM56 |
HGNC: | 26477 |
UniProt: | Q96MV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 7.70e-21 | 2 |
erythroblast | 7.70e-21 | 2 |
megakaryocyte-erythroid progenitor cell | 7.70e-21 | 2 |
erythroid progenitor cell | 7.70e-21 | 2 |
reticulocyte | 7.70e-21 | 2 |
proerythroblast | 7.70e-21 | 2 |
basophilic erythroblast | 7.70e-21 | 2 |
polychromatophilic erythroblast | 7.70e-21 | 2 |
orthochromatic erythroblast | 7.70e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.75e-08 | 19 |
digestive gland | 2.75e-08 | 19 |
liver bud | 2.75e-08 | 19 |
hepatic diverticulum | 3.55e-07 | 22 |
liver primordium | 3.55e-07 | 22 |
digestive tract diverticulum | 7.19e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 2.70e-19 | 8 |